CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 21 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B21T21delT3284deldelACT---4545110115-10117

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B21T21delACT---4545All0.000009
ORF1ab/nsp5A-B21T21delACT---1717B.1.1.70.000015
ORF1ab/nsp5A-B21T21delACT---55AY.4.50.000537
ORF1ab/nsp5A-B21T21delACT---44B.1.1770.000053
ORF1ab/nsp5A-B21T21delACT---22AY.40.000003
ORF1ab/nsp5A-B21T21delACT---22AY.430.000009
ORF1ab/nsp5A-B21T21delACT---22AY.46.20.001271
ORF1ab/nsp5A-B21T21delACT---11AY.1110.000183
ORF1ab/nsp5A-B21T21delACT---11AY.250.000006
ORF1ab/nsp5A-B21T21delACT---11AY.50.000021
ORF1ab/nsp5A-B21T21delACT---11AY.70.000196
ORF1ab/nsp5A-B21T21delACT---11B.1.1.1590.004673
ORF1ab/nsp5A-B21T21delACT---11B.1.1610.017241
ORF1ab/nsp5A-B21T21delACT---11B.1.177.100.000878
ORF1ab/nsp5A-B21T21delACT---11B.1.177.180.00116
ORF1ab/nsp5A-B21T21delACT---11B.1.177.690.001484
ORF1ab/nsp5A-B21T21delACT---11B.1.177.810.000189
ORF1ab/nsp5A-B21T21delACT---11B.1.1790.003759
ORF1ab/nsp5A-B21T21delACT---11B.1.258.30.001675
ORF1ab/nsp5A-B21T21delACT---11N.40.004255