CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 209 & Codon = Cac

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B209Y209HY3472HnonsynTacCac36320.88888910679-10681

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B209Y209HTacCac3236All0.000006
ORF1ab/nsp5A-B209Y209HTacCac480.222222
ORF1ab/nsp5A-B209Y209HTacCac55B.10.000046
ORF1ab/nsp5A-B209Y209HTacCac44B.1.1.70.000004
ORF1ab/nsp5A-B209Y209HTacCac44P.10.000063
ORF1ab/nsp5A-B209Y209HTacCac22A.70.111111
ORF1ab/nsp5A-B209Y209HTacCac22AY.40.000003
ORF1ab/nsp5A-B209Y209HTacCac22P.1.170.000324
ORF1ab/nsp5A-B209Y209HTacCac11AY.30.00001
ORF1ab/nsp5A-B209Y209HTacCac11AY.46.20.000635
ORF1ab/nsp5A-B209Y209HTacCac11AY.670.000464
ORF1ab/nsp5A-B209Y209HTacCac11B.1.10.000018
ORF1ab/nsp5A-B209Y209HTacCac11B.1.1.3180.000302
ORF1ab/nsp5A-B209Y209HTacCac11B.1.177.90.001332
ORF1ab/nsp5A-B209Y209HTacCac11B.1.3510.00003
ORF1ab/nsp5A-B209Y209HTacCac11B.1.351.50.0006
ORF1ab/nsp5A-B209Y209HTacCac11B.1.5640.000426