CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 196 & Codon = acT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp5A-B	196	T196T	T3459T	syn	acG	acT	13418	12393	0.92361	10640-10642

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp5A-B	196	T196T	acG	acT	12393	13418	All	0.00237
ORF1ab/nsp5A-B	196	T196T	acG	acT	7992	8004	AY.20	0.31061
ORF1ab/nsp5A-B	196	T196T	acG	acT	721	865	B.1.1.7	0.000645
ORF1ab/nsp5A-B	196	T196T	acG	acT	340	522	B.1.617.2	0.00128
ORF1ab/nsp5A-B	196	T196T	acG	acT	297	331	AY.4	0.000462
ORF1ab/nsp5A-B	196	T196T	acG	acT	211	325	AY.103	0.00131
ORF1ab/nsp5A-B	196	T196T	acG	acT	301	301	AY.42	0.012109
ORF1ab/nsp5A-B	196	T196T	acG	acT	286	293	B.1.2	0.002518
ORF1ab/nsp5A-B	196	T196T	acG	acT	171	173	AY.44	0.001041
ORF1ab/nsp5A-B	196	T196T	acG	acT	157	166	B.1.1	0.002848
ORF1ab/nsp5A-B	196	T196T	acG	acT	95	99	P.1	0.001497
ORF1ab/nsp5A-B	196	T196T	acG	acT	91	98	AY.26	0.002576
ORF1ab/nsp5A-B	196	T196T	acG	acT	68	98	B.1	0.000623
ORF1ab/nsp5A-B	196	T196T	acG	acT	78	92	AY.43	0.000346
ORF1ab/nsp5A-B	196	T196T	acG	acT	38	90	AY.25	0.000229
ORF1ab/nsp5A-B	196	T196T	acG	acT	72	79	B.1.177	0.000948
ORF1ab/nsp5A-B	196	T196T	acG	acT	73	75	AY.114	0.016871
ORF1ab/nsp5A-B	196	T196T	acG	acT	68	74	AY.4.2	0.001475
ORF1ab/nsp5A-B	196	T196T	acG	acT	57	63	AY.5	0.001177
ORF1ab/nsp5A-B	196	T196T	acG	acT	17	61	AY.29	0.000268
ORF1ab/nsp5A-B	196	T196T	acG	acT	24	59	AY.100	0.001104
ORF1ab/nsp5A-B	196	T196T	acG	acT	50	57	AY.102	0.001326
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	53	P.1.15	0.001626
ORF1ab/nsp5A-B	196	T196T	acG	acT	49	52	B.1.427	0.002474
ORF1ab/nsp5A-B	196	T196T	acG	acT	43	50	B.1.526	0.001011
ORF1ab/nsp5A-B	196	T196T	acG	acT	45	47	AY.120	0.001673
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	45	AY.118	0.000063
ORF1ab/nsp5A-B	196	T196T	acG	acT	41	41	B.1.1.268	0.61194
ORF1ab/nsp5A-B	196	T196T	acG	acT	37	38	AY.6	0.001522
ORF1ab/nsp5A-B	196	T196T	acG	acT	27	33	AY.3	0.000269
ORF1ab/nsp5A-B	196	T196T	acG	acT	33	33	B.1.160	0.001029
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	33	P.1.7	0.001277
ORF1ab/nsp5A-B	196	T196T	acG	acT	27	27	AY.113	0.003845
ORF1ab/nsp5A-B	196	T196T	acG	acT	26	26	B.1.1.318	0.007846
ORF1ab/nsp5A-B	196	T196T	acG	acT	24	25	P.1.14	0.001147
ORF1ab/nsp5A-B	196	T196T	acG	acT	10	24	AY.117	0.000845
ORF1ab/nsp5A-B	196	T196T	acG	acT	24	24	B.1.1.33	0.010101
ORF1ab/nsp5A-B	196	T196T	acG	acT	21	22	AY.33	0.001402
ORF1ab/nsp5A-B	196	T196T	acG	acT	21	21	AY.9.2	0.000771
ORF1ab/nsp5A-B	196	T196T	acG	acT	16	21	B.1.351	0.000476
ORF1ab/nsp5A-B	196	T196T	acG	acT	19	21	B.1.36	0.002772
ORF1ab/nsp5A-B	196	T196T	acG	acT	19	21	B.1.429	0.000447
ORF1ab/nsp5A-B	196	T196T	acG	acT	13	19	B.1.1.519	0.000516
ORF1ab/nsp5A-B	196	T196T	acG	acT	16	18	B.1.177.73	0.00906
ORF1ab/nsp5A-B	196	T196T	acG	acT	17	17	AY.27	0.0011
ORF1ab/nsp5A-B	196	T196T	acG	acT	16	17	AY.75.1	0.002885
ORF1ab/nsp5A-B	196	T196T	acG	acT	16	17	B.1.111	0.018801
ORF1ab/nsp5A-B	196	T196T	acG	acT	15	15	AY.119	0.00053
ORF1ab/nsp5A-B	196	T196T	acG	acT	9	15	AY.61	0.000943
ORF1ab/nsp5A-B	196	T196T	acG	acT	15	15	B.1.1.369	0.006693
ORF1ab/nsp5A-B	196	T196T	acG	acT	15	15	B.1.390	0.159574
ORF1ab/nsp5A-B	196	T196T	acG	acT	15	15	B.1.596	0.001307
ORF1ab/nsp5A-B	196	T196T	acG	acT	12	14	AY.46	0.001249
ORF1ab/nsp5A-B	196	T196T	acG	acT	14	14	AY.98	0.001106
ORF1ab/nsp5A-B	196	T196T	acG	acT	12	14	C.37	0.001393
ORF1ab/nsp5A-B	196	T196T	acG	acT	13	13	B.1.617.1	0.001677
ORF1ab/nsp5A-B	196	T196T	acG	acT	9	12	AY.39	0.000222
ORF1ab/nsp5A-B	196	T196T	acG	acT	12	12	B.1.36.8	0.012
ORF1ab/nsp5A-B	196	T196T	acG	acT	10	10	AY.120.1	0.00321
ORF1ab/nsp5A-B	196	T196T	acG	acT	10	10	B.1.1.222	0.00204
ORF1ab/nsp5A-B	196	T196T	acG	acT	10	10	B.1.36.29	0.005173
ORF1ab/nsp5A-B	196	T196T	acG	acT	9	9	AY.121	0.001218
ORF1ab/nsp5A-B	196	T196T	acG	acT	9	9	B.1.1.28	0.002801
ORF1ab/nsp5A-B	196	T196T	acG	acT	9	9	P.1.1	0.002859
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	8	AY.23	0.000488
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	8	AY.71	0.003325
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	8	B.1.240	0.000431
ORF1ab/nsp5A-B	196	T196T	acG	acT	8	8	B.1.466.2	0.00313
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	8	B.1.621	0.000354
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	7	AY.105	0.004502
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	7	AY.45	0.000852
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	7	AY.98.1	0.000097
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	7	B.1.1.306	0.003069
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	7	B.1.36.18	0.002941
ORF1ab/nsp5A-B	196	T196T	acG	acT	7	7	P.2	0.001306
ORF1ab/nsp5A-B	196	T196T	acG	acT	6	6	AY.73	0.003992
ORF1ab/nsp5A-B	196	T196T	acG	acT	6	6	B.1.1.526	0.021277
ORF1ab/nsp5A-B	196	T196T	acG	acT	6	6	B.1.36.31	0.010508
ORF1ab/nsp5A-B	196	T196T	acG	acT	6	6	B.1.499.1	0.666667
ORF1ab/nsp5A-B	196	T196T	acG	acT	6	6	B.1.503	0.014925
ORF1ab/nsp5A-B	196	T196T	acG	acT	6	6	B.1.524	0.008439
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	5	AY.104	0.003968
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	AY.34	0.000485
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	5	AY.39.1	0.000158
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	AY.5.4	0.001384
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	5	AY.75	0.000224
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	5	AY.99.2	0.000276
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	B.1.1.132	0.074627
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	B.1.1.50	0.003394
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	B.1.243	0.000348
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	5	B.1.258	0.000266
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	B.1.609	0.002397
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	D.2	0.000375
ORF1ab/nsp5A-B	196	T196T	acG	acT	5	5	R.1	0.00045
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	AY.1	0.001583
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	AY.16	0.001519
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	4	AY.47	0.000062
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	AY.51	0.003636
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	AY.9.1	0.000335
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	4	AY.92	0.000862
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	B	0.000511
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	4	B.1.1.216	0.002671
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	B.1.1.304	0.011236
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	4	B.1.1.448	0.006098
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	4	B.1.177.21	0.000229
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	B.1.425	0.011976
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	4	B.1.525	0.000339
ORF1ab/nsp5A-B	196	T196T	acG	acT	4	4	B.1.637	0.000292
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	3		0.055556
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	A.28	0.007937
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.116.1	0.000934
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.13	0.000483
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	3	AY.24	0.000862
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.36	0.000445
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.54	0.000286
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.59	0.001589
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.81	0.005976
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.82	0.004071
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.84	0.001312
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	AY.9	0.000203
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	B.1.1.170	0.003741
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	B.1.1.284	0.000322
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	B.1.214.2	0.001799
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	B.1.258.16	0.00491
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	3	B.1.351.2	0.000303
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	B.1.369	0.000856
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	B.1.551	0.003871
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	C.35	0.002322
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	P.1.17	0.000485
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	3	P.1.8	0.004785
ORF1ab/nsp5A-B	196	T196T	acG	acT	3	3	P.7	0.0131
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	A.3	0.004193
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AE.8	0.000978
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.16.1	0.00094
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.22	0.004184
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.32	0.001065
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.38	0.000999
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.4.2.1	0.000298
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.4.4	0.000818
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.4.5	0.000215
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.40	0.001929
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.46.6	0.000144
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.60	0.001876
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.62	0.000871
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.69	0.000373
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.7.1	0.000225
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.74	0.000231
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.88	0.001768
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.90	0.001369
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	AY.99.1	0.003106
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.1.133	0.016949
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.1.174	0.006757
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.1.234	0.024096
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.1.269	0.002706
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.1.312	0.003824
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	2	B.1.1.70	0.000341
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.177.17	0.001642
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	2	B.1.221	0.000071
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.389	0.002004
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.428	0.002041
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	2	B.1.564	0.000426
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.565	0.001621
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	B.1.617.3	0.00597
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	2	B.1.628	0.000352
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	P.1.12	0.000968
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	Q.1	0.000253
ORF1ab/nsp5A-B	196	T196T	acG	acT	2	2	Q.8	0.00033
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	A.2.5	0.000499
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AL.1	0.012987
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.107	0.000466
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.111	0.000183
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.116	0.000287
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.46.2	0.000635
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.46.4	0.000165
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.57	0.000656
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.67	0.000464
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.68	0.000274
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.70	0.000209
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.8	0.000606
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.85	0.000427
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.86	0.00083
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	AY.95	0.000761
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.1	0.000327
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.10	0.001115
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.117	0.009709
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.176	0.000439
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.181	0.004545
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.189	0.001513
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.220	0.001859
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.237	0.005405
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.255	0.00303
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.294	0.001266
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.301	0.001179
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.370	0.012658
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.406	0.006494
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.432	0.001266
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.433	0.001425
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.48	0.002874
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.507	0.008696
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.58	0.005376
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.63	0.000386
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.83	0.00271
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.1.90	0.1
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.140	0.018868
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.143	0.021277
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.12	0.000152
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.31	0.011494
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.44	0.000519
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.50	0.004695
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.56	0.000668
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.6	0.000977
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.7	0.000165
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.77	0.000726
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.177.87	0.000728
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.210	0.002132
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.214.1	0.02
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.234	0.000132
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.258.17	0.000104
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.305	0.002151
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.311	0.000275
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.313	0.006579
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.351.3	0.000876
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.351.5	0.0006
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.36.17	0.000494
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.366	0.004878
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.367	0.000792
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.371	0.001122
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.391	0.001127
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.422	0.000812
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.456	0.003268
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.466	0.023256
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.470	0.001404
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.540	0.009709
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.560	0.00463
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.561	0.000397
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.597	0.00463
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.601	0.030303
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.620	0.000946
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.1.621.1	0.000506
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.29	0.003509
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.39	0.002331
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	B.46	0.020833
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	P.1.10	0.000269
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	P.1.16	0.000374
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	P.4	0.003802
ORF1ab/nsp5A-B	196	T196T	acG	acT	1	1	Q.3	0.000145

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.