CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 196 & Codon = acC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B196T196TT3459TsynacGacC13418220.0016395910640-10642

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B196T196TacGacC2213418All0.000004
ORF1ab/nsp5A-B196T196TacGacC11865B.1.1.70.00001
ORF1ab/nsp5A-B196T196TacGacC2522B.1.617.20.000008
ORF1ab/nsp5A-B196T196TacGacC1331AY.40.000002
ORF1ab/nsp5A-B196T196TacGacC1325AY.1030.000006
ORF1ab/nsp5A-B196T196TacGacC1173AY.440.000006
ORF1ab/nsp5A-B196T196TacGacC198B.10.000009
ORF1ab/nsp5A-B196T196TacGacC147AY.1200.000037
ORF1ab/nsp5A-B196T196TacGacC15AY.750.000056
ORF1ab/nsp5A-B196T196TacGacC130.055556
ORF1ab/nsp5A-B196T196TacGacC12B.1.1.700.000341
ORF1ab/nsp5A-B196T196TacGacC11B.1.1.3540.004386