CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 196 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B196T196delT3459deldelACG---4949110640-10642

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B196T196delACG---4949All0.000009
ORF1ab/nsp5A-B196T196delACG---1616B.1.1.70.000014
ORF1ab/nsp5A-B196T196delACG---440.222222
ORF1ab/nsp5A-B196T196delACG---22AY.40.000003
ORF1ab/nsp5A-B196T196delACG---22AY.4.50.000215
ORF1ab/nsp5A-B196T196delACG---22AY.430.000009
ORF1ab/nsp5A-B196T196delACG---22B.1.10.000036
ORF1ab/nsp5A-B196T196delACG---22B.1.1.2360.013793
ORF1ab/nsp5A-B196T196delACG---22B.1.5610.000794
ORF1ab/nsp5A-B196T196delACG---22B.1.617.20.000008
ORF1ab/nsp5A-B196T196delACG---11AY.230.00007
ORF1ab/nsp5A-B196T196delACG---11AY.420.00004
ORF1ab/nsp5A-B196T196delACG---11AY.750.000056
ORF1ab/nsp5A-B196T196delACG---11AY.990.001049
ORF1ab/nsp5A-B196T196delACG---11B.10.000009
ORF1ab/nsp5A-B196T196delACG---11B.1.1.2880.001916
ORF1ab/nsp5A-B196T196delACG---11B.1.1770.000013
ORF1ab/nsp5A-B196T196delACG---11B.1.177.760.002494
ORF1ab/nsp5A-B196T196delACG---11B.1.2580.000067
ORF1ab/nsp5A-B196T196delACG---11B.1.258.30.001675
ORF1ab/nsp5A-B196T196delACG---11B.1.3510.00003
ORF1ab/nsp5A-B196T196delACG---11B.1.360.000146
ORF1ab/nsp5A-B196T196delACG---11C.360.000911
ORF1ab/nsp5A-B196T196delACG---11N.40.004255
ORF1ab/nsp5A-B196T196delACG---11Q.10.000126