CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 176 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B176D176DD3439DsyngaCgaT91789178110580-10582

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B176D176DgaCgaT91789178All0.001755
ORF1ab/nsp5A-B176D176DgaCgaT21302130B.1.1.70.001907
ORF1ab/nsp5A-B176D176DgaCgaT11311131B.1.3670.896197
ORF1ab/nsp5A-B176D176DgaCgaT510510B.1.20.004491
ORF1ab/nsp5A-B176D176DgaCgaT454454AY.40.000707
ORF1ab/nsp5A-B176D176DgaCgaT425425AY.430.001883
ORF1ab/nsp5A-B176D176DgaCgaT415415B.1.1.1890.627837
ORF1ab/nsp5A-B176D176DgaCgaT367367B.10.003362
ORF1ab/nsp5A-B176D176DgaCgaT291291B.1.1.5190.011556
ORF1ab/nsp5A-B176D176DgaCgaT271271AY.30.002695
ORF1ab/nsp5A-B176D176DgaCgaT228228AY.1030.001416
ORF1ab/nsp5A-B176D176DgaCgaT216216B.1.5971
ORF1ab/nsp5A-B176D176DgaCgaT187187B.1.617.20.000704
ORF1ab/nsp5A-B176D176DgaCgaT171171B.1.1.3480.136146
ORF1ab/nsp5A-B176D176DgaCgaT144144P.10.002269
ORF1ab/nsp5A-B176D176DgaCgaT141141B.1.1770.001857
ORF1ab/nsp5A-B176D176DgaCgaT7979B.1.10.001433
ORF1ab/nsp5A-B176D176DgaCgaT7979B.1.360.011526
ORF1ab/nsp5A-B176D176DgaCgaT7777AY.440.000469
ORF1ab/nsp5A-B176D176DgaCgaT7474AY.250.000445
ORF1ab/nsp5A-B176D176DgaCgaT7272B.1.2210.005114
ORF1ab/nsp5A-B176D176DgaCgaT6565AY.39.10.002575
ORF1ab/nsp5A-B176D176DgaCgaT5959AY.1020.001564
ORF1ab/nsp5A-B176D176DgaCgaT5858AY.60.002385
ORF1ab/nsp5A-B176D176DgaCgaT5454B.1.4290.001271
ORF1ab/nsp5A-B176D176DgaCgaT5252B.1.177.860.00954
ORF1ab/nsp5A-B176D176DgaCgaT5151B.1.1.4340.017776
ORF1ab/nsp5A-B176D176DgaCgaT5151B.1.401
ORF1ab/nsp5A-B176D176DgaCgaT4848AY.670.022284
ORF1ab/nsp5A-B176D176DgaCgaT4848B.1.1.2220.009792
ORF1ab/nsp5A-B176D176DgaCgaT4545B.1.177.600.00983
ORF1ab/nsp5A-B176D176DgaCgaT4444AY.46.60.003177
ORF1ab/nsp5A-B176D176DgaCgaT4242B.1.1.280.013072
ORF1ab/nsp5A-B176D176DgaCgaT4242B.1.2430.002923
ORF1ab/nsp5A-B176D176DgaCgaT3838AY.450.004624
ORF1ab/nsp5A-B176D176DgaCgaT3636B.1.1.4320.04557
ORF1ab/nsp5A-B176D176DgaCgaT3434AY.9.20.001249
ORF1ab/nsp5A-B176D176DgaCgaT3131C.370.003598
ORF1ab/nsp5A-B176D176DgaCgaT2828B.1.1.2140.001553
ORF1ab/nsp5A-B176D176DgaCgaT2727B.1.177.720.091525
ORF1ab/nsp5A-B176D176DgaCgaT2626AY.200.00101
ORF1ab/nsp5A-B176D176DgaCgaT2121AY.390.000519
ORF1ab/nsp5A-B176D176DgaCgaT2020B.1.3510.000595
ORF1ab/nsp5A-B176D176DgaCgaT1919AY.98.10.00092
ORF1ab/nsp5A-B176D176DgaCgaT1818B.1.160.170.030612
ORF1ab/nsp5A-B176D176DgaCgaT1818B.1.4270.000909
ORF1ab/nsp5A-B176D176DgaCgaT1616AY.1000.000736
ORF1ab/nsp5A-B176D176DgaCgaT1515B.1.1600.000468
ORF1ab/nsp5A-B176D176DgaCgaT1515B.1.3690.004278
ORF1ab/nsp5A-B176D176DgaCgaT1515B.1.6370.001096
ORF1ab/nsp5A-B176D176DgaCgaT1414AY.1190.000494
ORF1ab/nsp5A-B176D176DgaCgaT1414B.1.36.380.022989
ORF1ab/nsp5A-B176D176DgaCgaT1313B.1.5260.000306
ORF1ab/nsp5A-B176D176DgaCgaT1313B.1.5770.008935
ORF1ab/nsp5A-B176D176DgaCgaT1212AY.1200.000446
ORF1ab/nsp5A-B176D176DgaCgaT1212AY.4.50.00129
ORF1ab/nsp5A-B176D176DgaCgaT1212AY.750.000672
ORF1ab/nsp5A-B176D176DgaCgaT1111B.1.1.4160.009955
ORF1ab/nsp5A-B176D176DgaCgaT1010AY.4.20.000217
ORF1ab/nsp5A-B176D176DgaCgaT1010AY.50.000206
ORF1ab/nsp5A-B176D176DgaCgaT1010B.1.2400.002156
ORF1ab/nsp5A-B176D176DgaCgaT1010B.1.6210.000885
ORF1ab/nsp5A-B176D176DgaCgaT99B.1.2100.01919
ORF1ab/nsp5A-B176D176DgaCgaT99B.1.258.170.000936
ORF1ab/nsp5A-B176D176DgaCgaT88AY.1170.000676
ORF1ab/nsp5A-B176D176DgaCgaT88AY.160.003037
ORF1ab/nsp5A-B176D176DgaCgaT88B.1.2580.000532
ORF1ab/nsp5A-B176D176DgaCgaT88B.1.416.10.0125
ORF1ab/nsp5A-B176D176DgaCgaT88P.20.001493
ORF1ab/nsp5A-B176D176DgaCgaT88Q.10.001011
ORF1ab/nsp5A-B176D176DgaCgaT77AY.540.000667
ORF1ab/nsp5A-B176D176DgaCgaT77AY.980.000553
ORF1ab/nsp5A-B176D176DgaCgaT77B.1.351.20.002118
ORF1ab/nsp5A-B176D176DgaCgaT77B.1.36.80.007
ORF1ab/nsp5A-B176D176DgaCgaT77B.1.3990.01354
ORF1ab/nsp5A-B176D176DgaCgaT77B.1.4000.003003
ORF1ab/nsp5A-B176D176DgaCgaT77P.1.140.000335
ORF1ab/nsp5A-B176D176DgaCgaT66AY.330.000401
ORF1ab/nsp5A-B176D176DgaCgaT66AY.460.000624
ORF1ab/nsp5A-B176D176DgaCgaT66AY.690.00112
ORF1ab/nsp5A-B176D176DgaCgaT66AY.920.001724
ORF1ab/nsp5A-B176D176DgaCgaT66B0.000767
ORF1ab/nsp5A-B176D176DgaCgaT66B.1.1.1530.006572
ORF1ab/nsp5A-B176D176DgaCgaT66B.1.1.2840.000644
ORF1ab/nsp5A-B176D176DgaCgaT66B.1.1.3170.00247
ORF1ab/nsp5A-B176D176DgaCgaT66B.1.1.370.001157
ORF1ab/nsp5A-B176D176DgaCgaT66B.1.2320.003224
ORF1ab/nsp5A-B176D176DgaCgaT66B.1.5950.001566
ORF1ab/nsp5A-B176D176DgaCgaT66P.1.150.001394
ORF1ab/nsp5A-B176D176DgaCgaT55AY.1180.000313
ORF1ab/nsp5A-B176D176DgaCgaT55AY.130.000805
ORF1ab/nsp5A-B176D176DgaCgaT55AY.46.50.000992
ORF1ab/nsp5A-B176D176DgaCgaT55AY.680.001369
ORF1ab/nsp5A-B176D176DgaCgaT55AY.75.10.000902
ORF1ab/nsp5A-B176D176DgaCgaT55B.1.1.330.002104
ORF1ab/nsp5A-B176D176DgaCgaT55B.1.1.4330.007123
ORF1ab/nsp5A-B176D176DgaCgaT55B.1.177.630.013514
ORF1ab/nsp5A-B176D176DgaCgaT55B.1.2340.00066
ORF1ab/nsp5A-B176D176DgaCgaT55B.1.36.290.002587
ORF1ab/nsp5A-B176D176DgaCgaT55C.30.10.033557
ORF1ab/nsp5A-B176D176DgaCgaT55R.10.00045
ORF1ab/nsp5A-B176D176DgaCgaT44AY.10.001583
ORF1ab/nsp5A-B176D176DgaCgaT44AY.340.000388
ORF1ab/nsp5A-B176D176DgaCgaT44AY.840.00175
ORF1ab/nsp5A-B176D176DgaCgaT44AY.90.00027
ORF1ab/nsp5A-B176D176DgaCgaT44B.1.160.180.029197
ORF1ab/nsp5A-B176D176DgaCgaT44B.1.177.120.000607
ORF1ab/nsp5A-B176D176DgaCgaT44B.1.177.810.000757
ORF1ab/nsp5A-B176D176DgaCgaT44B.1.3110.001098
ORF1ab/nsp5A-B176D176DgaCgaT44B.1.3240.006421
ORF1ab/nsp5A-B176D176DgaCgaT44B.1.5640.001704
ORF1ab/nsp5A-B176D176DgaCgaT44B.1.5960.000349
ORF1ab/nsp5A-B176D176DgaCgaT44P.1.20.004624
ORF1ab/nsp5A-B176D176DgaCgaT33A.270.004967
ORF1ab/nsp5A-B176D176DgaCgaT33AE.80.001467
ORF1ab/nsp5A-B176D176DgaCgaT33AY.120.10.000963
ORF1ab/nsp5A-B176D176DgaCgaT33AY.16.10.00141
ORF1ab/nsp5A-B176D176DgaCgaT33AY.230.000209
ORF1ab/nsp5A-B176D176DgaCgaT33AY.260.000085
ORF1ab/nsp5A-B176D176DgaCgaT33AY.4.40.001227
ORF1ab/nsp5A-B176D176DgaCgaT33AY.420.000121
ORF1ab/nsp5A-B176D176DgaCgaT33AY.46.40.000494
ORF1ab/nsp5A-B176D176DgaCgaT33AY.470.000093
ORF1ab/nsp5A-B176D176DgaCgaT33AY.99.20.000276
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.1.1480.026316
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.1.2160.002671
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.1.2630.004673
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.1.4170.008108
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.1.5230.004687
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.1.540.009063
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.1.630.001157
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.177.540.001819
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.5250.000339
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.617.10.000387
ORF1ab/nsp5A-B176D176DgaCgaT33B.1.9.50.017045
ORF1ab/nsp5A-B176D176DgaCgaT33P.1.120.001452
ORF1ab/nsp5A-B176D176DgaCgaT33Q.80.000495
ORF1ab/nsp5A-B176D176DgaCgaT22AW.10.006098
ORF1ab/nsp5A-B176D176DgaCgaT22AY.1100.000225
ORF1ab/nsp5A-B176D176DgaCgaT22AY.240.000862
ORF1ab/nsp5A-B176D176DgaCgaT22AY.290.000032
ORF1ab/nsp5A-B176D176DgaCgaT22AY.3.10.000171
ORF1ab/nsp5A-B176D176DgaCgaT22AY.360.000296
ORF1ab/nsp5A-B176D176DgaCgaT22AY.370.000632
ORF1ab/nsp5A-B176D176DgaCgaT22AY.610.00021
ORF1ab/nsp5A-B176D176DgaCgaT22AY.620.000871
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.1760.000879
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.2310.006192
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.3060.000877
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.3180.000604
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.3970.004505
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.4090.005666
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.4640.002946
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.1.5280.009615
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.177.870.001456
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.258.40.006897
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.3050.004301
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.3320.006993
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.36.170.000988
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.4030.006536
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.4090.001563
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.4280.002041
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.4530.006472
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.466.20.000782
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.5610.000794
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.6230.001073
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.6300.010471
ORF1ab/nsp5A-B176D176DgaCgaT22B.1.80.003945
ORF1ab/nsp5A-B176D176DgaCgaT22C.160.002121
ORF1ab/nsp5A-B176D176DgaCgaT22C.360.001821
ORF1ab/nsp5A-B176D176DgaCgaT22D.20.00015
ORF1ab/nsp5A-B176D176DgaCgaT22P.1.70.000639
ORF1ab/nsp5A-B176D176DgaCgaT11A0.000387
ORF1ab/nsp5A-B176D176DgaCgaT11A.23.10.000704
ORF1ab/nsp5A-B176D176DgaCgaT11AP.10.001502
ORF1ab/nsp5A-B176D176DgaCgaT11AT.10.005128
ORF1ab/nsp5A-B176D176DgaCgaT11AY.1090.00074
ORF1ab/nsp5A-B176D176DgaCgaT11AY.110.001339
ORF1ab/nsp5A-B176D176DgaCgaT11AY.1130.000142
ORF1ab/nsp5A-B176D176DgaCgaT11AY.1140.000231
ORF1ab/nsp5A-B176D176DgaCgaT11AY.1210.000135
ORF1ab/nsp5A-B176D176DgaCgaT11AY.140.000088
ORF1ab/nsp5A-B176D176DgaCgaT11AY.20.000356
ORF1ab/nsp5A-B176D176DgaCgaT11AY.29.10.000221
ORF1ab/nsp5A-B176D176DgaCgaT11AY.300.000396
ORF1ab/nsp5A-B176D176DgaCgaT11AY.34.10.00051
ORF1ab/nsp5A-B176D176DgaCgaT11AY.39.20.001541
ORF1ab/nsp5A-B176D176DgaCgaT11AY.520.000814
ORF1ab/nsp5A-B176D176DgaCgaT11AY.530.000288
ORF1ab/nsp5A-B176D176DgaCgaT11AY.570.000656
ORF1ab/nsp5A-B176D176DgaCgaT11AY.590.00053
ORF1ab/nsp5A-B176D176DgaCgaT11AY.70.000196
ORF1ab/nsp5A-B176D176DgaCgaT11AY.7.10.000113
ORF1ab/nsp5A-B176D176DgaCgaT11AY.710.000475
ORF1ab/nsp5A-B176D176DgaCgaT11AY.740.000116
ORF1ab/nsp5A-B176D176DgaCgaT11AY.760.004831
ORF1ab/nsp5A-B176D176DgaCgaT11AY.9.10.000084
ORF1ab/nsp5A-B176D176DgaCgaT11AY.910.00073
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.10.000327
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.1570.000913
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.1610.003534
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.1920.002309
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.2010.02439
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.2360.006897
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.2410.00207
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.2430.004082
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.2440.015385
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.250.000569
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.2740.005051
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.3120.001912
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.3980.003226
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.4190.007407
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.460.004367
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.4660.008696
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.4850.016667
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.500.000679
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.5150.02
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.5250.005464
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1.710.006061
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1040.00369
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.120.008
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1390.000733
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.1570.002985
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.177.180.00116
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.177.310.011494
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.177.40.000211
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.177.510.004566
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.177.580.001332
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.177.60.000977
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.177.90.001332
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.2140.003663
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.214.20.0006
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.2230.002778
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.2470.014925
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.2600.003344
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.2650.001271
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.3100.047619
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.3290.000608
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.3460.001311
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.351.50.0006
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.3560.001727
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.36.180.00042
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.36.340.021277
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.36.390.002217
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.3620.001541
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.3970.004854
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.4110.003704
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.4160.001269
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.4220.000812
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.4370.020833
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.4420.035714
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.4460.02
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.4990.00105
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.5170.000427
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.5230.002451
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.5330.009615
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.5520.015152
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.5820.000491
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.5870.001898
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.6090.000479
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.6270.00202
ORF1ab/nsp5A-B176D176DgaCgaT11B.1.910.002075
ORF1ab/nsp5A-B176D176DgaCgaT11B.30.000831
ORF1ab/nsp5A-B176D176DgaCgaT11B.4.10.018868
ORF1ab/nsp5A-B176D176DgaCgaT11B.450.003831
ORF1ab/nsp5A-B176D176DgaCgaT11B.60.00091
ORF1ab/nsp5A-B176D176DgaCgaT11C.140.004329
ORF1ab/nsp5A-B176D176DgaCgaT11C.36.30.000567
ORF1ab/nsp5A-B176D176DgaCgaT11C.90.030303
ORF1ab/nsp5A-B176D176DgaCgaT11P.1.160.000374
ORF1ab/nsp5A-B176D176DgaCgaT11P.1.170.000162
ORF1ab/nsp5A-B176D176DgaCgaT11P.30.001595
ORF1ab/nsp5A-B176D176DgaCgaT11Q.30.000145
ORF1ab/nsp5A-B176D176DgaCgaT11Q.40.000455