CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 161 & Codon = taT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B161Y161YY3424YsyntaCtaT63126312110535-10537

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B161Y161YtaCtaT63126312All0.001207
ORF1ab/nsp5A-B161Y161YtaCtaT14851485B.1.1.70.001329
ORF1ab/nsp5A-B161Y161YtaCtaT13841384AY.40.002154
ORF1ab/nsp5A-B161Y161YtaCtaT619619B.10.00567
ORF1ab/nsp5A-B161Y161YtaCtaT316316B.1.617.20.00119
ORF1ab/nsp5A-B161Y161YtaCtaT233233B.1.5260.005477
ORF1ab/nsp5A-B161Y161YtaCtaT138138AY.1030.000857
ORF1ab/nsp5A-B161Y161YtaCtaT127127AY.200.004936
ORF1ab/nsp5A-B161Y161YtaCtaT127127AY.430.000563
ORF1ab/nsp5A-B161Y161YtaCtaT116116B.1.177.70.019123
ORF1ab/nsp5A-B161Y161YtaCtaT111111B.1.1770.001462
ORF1ab/nsp5A-B161Y161YtaCtaT110110B.1.1.500.074678
ORF1ab/nsp5A-B161Y161YtaCtaT9898B.1.20.000863
ORF1ab/nsp5A-B161Y161YtaCtaT8585P.10.001339
ORF1ab/nsp5A-B161Y161YtaCtaT8080B.1.160.70.16632
ORF1ab/nsp5A-B161Y161YtaCtaT7070AY.1020.001856
ORF1ab/nsp5A-B161Y161YtaCtaT6969AY.1000.003174
ORF1ab/nsp5A-B161Y161YtaCtaT5454AY.9.10.004521
ORF1ab/nsp5A-B161Y161YtaCtaT5353AY.250.000319
ORF1ab/nsp5A-B161Y161YtaCtaT4646AY.440.00028
ORF1ab/nsp5A-B161Y161YtaCtaT3636AY.30.000358
ORF1ab/nsp5A-B161Y161YtaCtaT3636AY.9.20.001322
ORF1ab/nsp5A-B161Y161YtaCtaT3333B.1.1.2140.00183
ORF1ab/nsp5A-B161Y161YtaCtaT3232B.1.3340.581818
ORF1ab/nsp5A-B161Y161YtaCtaT3131B.1.6210.002744
ORF1ab/nsp5A-B161Y161YtaCtaT2929B.60.026388
ORF1ab/nsp5A-B161Y161YtaCtaT2727B.1.10.00049
ORF1ab/nsp5A-B161Y161YtaCtaT2626AY.920.007469
ORF1ab/nsp5A-B161Y161YtaCtaT2525AY.740.002891
ORF1ab/nsp5A-B161Y161YtaCtaT2424B.1.2580.001597
ORF1ab/nsp5A-B161Y161YtaCtaT2424B.1.4270.001212
ORF1ab/nsp5A-B161Y161YtaCtaT2222AY.420.000885
ORF1ab/nsp5A-B161Y161YtaCtaT2222B.1.2430.001531
ORF1ab/nsp5A-B161Y161YtaCtaT1818AY.260.00051
ORF1ab/nsp5A-B161Y161YtaCtaT1818AY.840.007874
ORF1ab/nsp5A-B161Y161YtaCtaT1717P.1.170.00275
ORF1ab/nsp5A-B161Y161YtaCtaT1616AY.50.00033
ORF1ab/nsp5A-B161Y161YtaCtaT1616B.1.1600.000499
ORF1ab/nsp5A-B161Y161YtaCtaT1414AY.390.000346
ORF1ab/nsp5A-B161Y161YtaCtaT1414R.10.00126
ORF1ab/nsp5A-B161Y161YtaCtaT1313AY.1140.003004
ORF1ab/nsp5A-B161Y161YtaCtaT1313B.1.1.4340.004531
ORF1ab/nsp5A-B161Y161YtaCtaT1313B.1.4050.160494
ORF1ab/nsp5A-B161Y161YtaCtaT1111AY.470.000342
ORF1ab/nsp5A-B161Y161YtaCtaT1111AY.540.001049
ORF1ab/nsp5A-B161Y161YtaCtaT1111AY.910.008035
ORF1ab/nsp5A-B161Y161YtaCtaT1010AY.46.60.000722
ORF1ab/nsp5A-B161Y161YtaCtaT1010B.1.3490.007148
ORF1ab/nsp5A-B161Y161YtaCtaT1010B.1.3960.007057
ORF1ab/nsp5A-B161Y161YtaCtaT99AY.1200.000335
ORF1ab/nsp5A-B161Y161YtaCtaT99AY.980.000711
ORF1ab/nsp5A-B161Y161YtaCtaT99B.1.1.3710.09375
ORF1ab/nsp5A-B161Y161YtaCtaT88AY.1170.000676
ORF1ab/nsp5A-B161Y161YtaCtaT88AY.1190.000282
ORF1ab/nsp5A-B161Y161YtaCtaT88B.1.1.2840.000859
ORF1ab/nsp5A-B161Y161YtaCtaT88B.1.1990.033058
ORF1ab/nsp5A-B161Y161YtaCtaT77AY.3.10.000597
ORF1ab/nsp5A-B161Y161YtaCtaT77B.1.1.280.002179
ORF1ab/nsp5A-B161Y161YtaCtaT77B.1.3510.000208
ORF1ab/nsp5A-B161Y161YtaCtaT77B.1.6340.023973
ORF1ab/nsp5A-B161Y161YtaCtaT66AY.230.000418
ORF1ab/nsp5A-B161Y161YtaCtaT66AY.290.000095
ORF1ab/nsp5A-B161Y161YtaCtaT66AY.60.000247
ORF1ab/nsp5A-B161Y161YtaCtaT66B.1.1.4270.857143
ORF1ab/nsp5A-B161Y161YtaCtaT66B.1.5250.000679
ORF1ab/nsp5A-B161Y161YtaCtaT66B.1.5750.00182
ORF1ab/nsp5A-B161Y161YtaCtaT55AY.1210.000677
ORF1ab/nsp5A-B161Y161YtaCtaT55AY.610.000524
ORF1ab/nsp5A-B161Y161YtaCtaT55B.1.1.250.002843
ORF1ab/nsp5A-B161Y161YtaCtaT55B.1.1.3180.001509
ORF1ab/nsp5A-B161Y161YtaCtaT55B.1.1.700.001705
ORF1ab/nsp5A-B161Y161YtaCtaT55B.1.360.00073
ORF1ab/nsp5A-B161Y161YtaCtaT55B.1.4160.006345
ORF1ab/nsp5A-B161Y161YtaCtaT55B.1.5170.002135
ORF1ab/nsp5A-B161Y161YtaCtaT55B.1.5950.001305
ORF1ab/nsp5A-B161Y161YtaCtaT55P.1.140.000239
ORF1ab/nsp5A-B161Y161YtaCtaT44AY.1050.002572
ORF1ab/nsp5A-B161Y161YtaCtaT44AY.380.001997
ORF1ab/nsp5A-B161Y161YtaCtaT44AY.860.00332
ORF1ab/nsp5A-B161Y161YtaCtaT44AY.98.10.000194
ORF1ab/nsp5A-B161Y161YtaCtaT44B.1.1.2220.000816
ORF1ab/nsp5A-B161Y161YtaCtaT44B.1.1.3060.001754
ORF1ab/nsp5A-B161Y161YtaCtaT44B.1.177.170.003284
ORF1ab/nsp5A-B161Y161YtaCtaT44B.1.258.170.000416
ORF1ab/nsp5A-B161Y161YtaCtaT44B.1.3540.173913
ORF1ab/nsp5A-B161Y161YtaCtaT44B.1.3990.007737
ORF1ab/nsp5A-B161Y161YtaCtaT44B.1.5100.105263
ORF1ab/nsp5A-B161Y161YtaCtaT44Q.80.00066
ORF1ab/nsp5A-B161Y161YtaCtaT33AD.10.012346
ORF1ab/nsp5A-B161Y161YtaCtaT33AE.80.001467
ORF1ab/nsp5A-B161Y161YtaCtaT33AY.410.000882
ORF1ab/nsp5A-B161Y161YtaCtaT33AY.450.000365
ORF1ab/nsp5A-B161Y161YtaCtaT33AY.46.40.000494
ORF1ab/nsp5A-B161Y161YtaCtaT33AY.530.000863
ORF1ab/nsp5A-B161Y161YtaCtaT33AY.99.20.000276
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.1.3110.001074
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.1.5190.000119
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.110.30.002155
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.1570.008955
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.2210.000213
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.2410.002435
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.4290.000071
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.5960.000261
ORF1ab/nsp5A-B161Y161YtaCtaT33B.1.617.10.000387
ORF1ab/nsp5A-B161Y161YtaCtaT33B.520.030303
ORF1ab/nsp5A-B161Y161YtaCtaT33P.1.100.000808
ORF1ab/nsp5A-B161Y161YtaCtaT33P.1.160.001122
ORF1ab/nsp5A-B161Y161YtaCtaT33P.20.00056
ORF1ab/nsp5A-B161Y161YtaCtaT220.111111
ORF1ab/nsp5A-B161Y161YtaCtaT22A.2.50.000998
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.1180.000125
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.330.000134
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.46.10.002053
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.500.001599
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.680.000547
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.690.000373
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.7.10.000225
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.930.000546
ORF1ab/nsp5A-B161Y161YtaCtaT22AY.940.000885
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.1.1760.000879
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.1.3480.001592
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.1.4160.00181
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.177.210.000153
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.177.810.000379
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.2340.000264
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.3200.002491
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.36.290.001035
ORF1ab/nsp5A-B161Y161YtaCtaT22B.1.6370.000146
ORF1ab/nsp5A-B161Y161YtaCtaT22D.20.00015
ORF1ab/nsp5A-B161Y161YtaCtaT22P.1.150.000465
ORF1ab/nsp5A-B161Y161YtaCtaT22P.1.70.000639
ORF1ab/nsp5A-B161Y161YtaCtaT22P.30.00319
ORF1ab/nsp5A-B161Y161YtaCtaT11A.30.002096
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.1100.000113
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.130.000161
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.160.00038
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.270.000065
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.340.000097
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.360.000148
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.39.10.00004
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.4.20.000022
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.4.30.000842
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.4.50.000107
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.460.000104
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.46.30.000934
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.46.50.000198
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.480.000465
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.520.000814
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.550.000917
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.570.000656
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.590.00053
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.670.000464
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.710.000475
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.750.000056
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.75.10.00018
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.800.001129
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.950.000761
ORF1ab/nsp5A-B161Y161YtaCtaT11AY.990.001049
ORF1ab/nsp5A-B161Y161YtaCtaT11B0.000128
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.1890.001513
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.2070.001182
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.2160.00089
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.2310.003096
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.2630.001558
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.2910.000742
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.3560.008547
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.3620.005618
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.370.000193
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.4090.002833
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.4640.001473
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.4660.008696
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1.510.001718
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.1690.014925
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.177.100.000878
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.177.150.000631
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.177.230.003236
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.177.350.000691
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.177.40.000211
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.177.430.001477
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.2120.016667
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.214.20.0006
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.2600.003344
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.36.170.000494
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.36.180.00042
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.36.220.001208
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.36.310.001751
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.36.360.000602
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.362.20.004717
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.3980.002976
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.4170.028571
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.4250.002994
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.438.10.000107
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.4660.023256
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.4900.1
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.5270.003704
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.5610.000397
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.5650.00081
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.5660.019231
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.5770.000687
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.6000.005848
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.6050.005952
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.6090.000479
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.6190.000871
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.6230.000536
ORF1ab/nsp5A-B161Y161YtaCtaT11B.1.6280.000352
ORF1ab/nsp5A-B161Y161YtaCtaT11C.350.000774
ORF1ab/nsp5A-B161Y161YtaCtaT11C.36.30.000567
ORF1ab/nsp5A-B161Y161YtaCtaT11N.30.005814
ORF1ab/nsp5A-B161Y161YtaCtaT11P.1.120.000484
ORF1ab/nsp5A-B161Y161YtaCtaT11Q.10.000126
ORF1ab/nsp5A-B161Y161YtaCtaT11Q.30.000145
ORF1ab/nsp5A-B161Y161YtaCtaT11Q.40.000455