CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp5A-B | 132 | P132S | P3395S | nonsyn | Ccc | Tcc | 5645 | 5631 | 0.99752 | 10448-10450 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5631 | 5645 | All | 0.001077 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 670 | 671 | AY.4 | 0.001043 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 642 | 642 | B.1.243 | 0.044673 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 623 | 623 | B.1.1.7 | 0.000558 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 592 | 593 | B.1.177 | 0.007795 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 417 | 419 | B.1.617.2 | 0.00157 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 275 | 275 | AY.43 | 0.001218 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 203 | 204 | B.1.1 | 0.003683 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 187 | 187 | B.1.177.81 | 0.035403 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 141 | 141 | AY.29 | 0.002224 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 104 | 104 | B.1.2 | 0.000916 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 98 | 98 | AY.102 | 0.002598 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 97 | 97 | AS.1 | 0.92381 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 93 | 93 | B.1 | 0.000852 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 89 | 89 | AY.103 | 0.000553 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 82 | 82 | AY.44 | 0.000499 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 77 | 77 | AY.25 | 0.000463 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 69 | 69 | AY.47 | 0.002146 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 67 | 67 | B.1.466.1 | 0.482014 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 61 | 61 | B.1.1.39 | 0.031091 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 60 | 60 | B.1.610 | 0.212766 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 55 | 55 | AY.39 | 0.001359 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 53 | 53 | B.1.429 | 0.001247 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 29 | 29 | AY.118 | 0.001817 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 28 | 29 | AY.23 | 0.001953 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 29 | 29 | N.10 | 0.852941 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 25 | 25 | B.1.1.316 | 0.023127 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 24 | 24 | C.30.1 | 0.161074 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 23 | 23 | AY.98 | 0.001817 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 22 | 22 | AY.100 | 0.001012 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 22 | 22 | AY.121 | 0.002977 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 19 | 19 | AY.20 | 0.000738 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 19 | 19 | AY.5 | 0.000392 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 19 | 19 | B.1.36.29 | 0.009829 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 18 | 18 | AY.3 | 0.000179 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 18 | 18 | B.1.177.17 | 0.014778 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 18 | 18 | P.1 | 0.000284 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 17 | 17 | B.1.1.317 | 0.006999 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 16 | 16 | B.1.596 | 0.001394 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 14 | 14 | AY.117 | 0.001183 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 14 | 14 | B.1.1.284 | 0.001504 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 14 | 14 | B.1.36 | 0.002043 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 13 | 14 | B.1.526 | 0.000306 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 14 | 14 | P.1.15 | 0.003253 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 13 | 13 | AY.26 | 0.000368 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 13 | 13 | AY.45 | 0.001582 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 13 | 13 | B.1.177.21 | 0.000994 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 9 | 9 | AY.98.1 | 0.000436 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 7 | 7 | AY.27 | 0.000453 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 7 | 7 | AY.61 | 0.000733 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 7 | 7 | B.1.1.225 | 0.05036 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 7 | 7 | B.1.177.32 | 0.009447 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 7 | 7 | B.1.177.60 | 0.001529 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 7 | 7 | B.1.93 | 0.006536 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | A.21 | 0.01662 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | AG.1 | 0.4 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | AY.110 | 0.000676 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | AY.119 | 0.000212 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | AY.9.1 | 0.000502 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | B.1.1.25 | 0.003411 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | B.1.351 | 0.000178 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 6 | 6 | Q.3 | 0.00087 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | AY.42 | 0.000201 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.1.33 | 0.002104 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.1.368 | 0.015432 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.111 | 0.005875 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.177.63 | 0.013514 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.258.17 | 0.00052 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.311 | 0.001373 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | B.1.575 | 0.001517 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 5 | 5 | Q.8 | 0.000825 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.106 | 0.00134 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.111 | 0.000733 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.120 | 0.000149 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.35 | 0.000932 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | B.1.396 | 0.002823 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | B.1.427 | 0.000202 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | A.23.1 | 0.002113 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | AY.70 | 0.000626 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.1.240 | 0.014085 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.128 | 0.001906 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.351.2 | 0.000908 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.356 | 0.005181 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.378 | 0.020548 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.551 | 0.003871 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.560 | 0.013889 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.620 | 0.002838 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 3 | 3 | P.6 | 0.009434 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | AY.34.1 | 0.00102 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.1.298 | 0.001724 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.1.374 | 0.004751 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.1.74 | 0.008621 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.279 | 0.001027 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.460 | 0.035714 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.604 | 0.034483 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | B.12 | 0.012821 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | C.32 | 0.046512 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | N.4 | 0.008511 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 2 | N.5 | 0.001767 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | AZ.5 | 0.003509 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.171 | 0.003676 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.297 | 0.002237 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.377 | 0.001381 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.433 | 0.001425 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.13 | 0.002375 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.160.24 | 0.004425 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.167 | 0.007812 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.180 | 0.05 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.344 | 0.008197 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.357 | 0.009524 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.405 | 0.012346 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.466 | 0.023256 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.516 | 0.001957 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.587 | 0.001898 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | P.1.6 | 0.001946 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp5A-B | 132 | P132S | Ccc | Tcc | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|