CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 132

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B132P132PP3395PsynccCccT936792930.992110448-10450
ORF1ab/nsp5A-B132P132PP3395PsynccCccA9367720.0076865610448-10450
ORF1ab/nsp5A-B132P132PP3395PsynccCccG936720.00021351610448-10450
ORF1ab/nsp5A-B132P132LP3395LnonsyncCccTc612261170.99918310448-10450
ORF1ab/nsp5A-B132P132LP3395LnonsyncCCcTT612250.00081672710448-10450
ORF1ab/nsp5A-B132P132SP3395SnonsynCccTcc564556310.9975210448-10450
ORF1ab/nsp5A-B132P132SP3395SnonsynCcCTcT5645130.0023029210448-10450
ORF1ab/nsp5A-B132P132SP3395SnonsynCcCTcA564510.00017714810448-10450
ORF1ab/nsp5A-B132P132HP3395HnonsyncCccAc4054040.99753110448-10450
ORF1ab/nsp5A-B132P132HP3395HnonsyncCCcAT40510.0024691410448-10450
ORF1ab/nsp5A-B132P132delP3395deldelCCC---7777110448-10450
ORF1ab/nsp5A-B132P132TP3395TnonsynCccAcc5454110448-10450
ORF1ab/nsp5A-B132P132AP3395AnonsynCccGcc4040110448-10450
ORF1ab/nsp5A-B132P132del1P3395del1delCcc-cc430.7510448-10450
ORF1ab/nsp5A-B132P132del1P3395del1delCcCGc-410.2510448-10450
ORF1ab/nsp5A-B132P132RP3395RnonsyncCccGc11110448-10450
ORF1ab/nsp5A-B132P132QP3395QnonsyncCCcAA11110448-10450

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B132P132PccCccT92939367All0.001777
ORF1ab/nsp5A-B132P132PccCccA729367All0.000014
ORF1ab/nsp5A-B132P132PccCccG29367All0
ORF1ab/nsp5A-B132P132LcCccTc61176122All0.00117
ORF1ab/nsp5A-B132P132LcCCcTT56122All0.000001
ORF1ab/nsp5A-B132P132SCccTcc56315645All0.001077
ORF1ab/nsp5A-B132P132SCcCTcT135645All0.000002
ORF1ab/nsp5A-B132P132SCcCTcA15645All0
ORF1ab/nsp5A-B132P132LcCccTc17901791AY.9.20.065746
ORF1ab/nsp5A-B132P132LcCCcTT11791AY.9.20.000037
ORF1ab/nsp5A-B132P132PccCccT14681468B.1.5260.034505
ORF1ab/nsp5A-B132P132PccCccT875875B.1.5680.972222
ORF1ab/nsp5A-B132P132PccCccT851860B.1.1.70.000762
ORF1ab/nsp5A-B132P132PccCccA9860B.1.1.70.000008
ORF1ab/nsp5A-B132P132PccCccT823829AY.40.001281
ORF1ab/nsp5A-B132P132PccCccA6829AY.40.000009
ORF1ab/nsp5A-B132P132SCccTcc670671AY.40.001043
ORF1ab/nsp5A-B132P132SCcCTcT1671AY.40.000002
ORF1ab/nsp5A-B132P132LcCccTc650650AP.10.975976
ORF1ab/nsp5A-B132P132SCccTcc642642B.1.2430.044673
ORF1ab/nsp5A-B132P132SCccTcc623623B.1.1.70.000558
ORF1ab/nsp5A-B132P132SCccTcc592593B.1.1770.007795
ORF1ab/nsp5A-B132P132SCcCTcT1593B.1.1770.000013
ORF1ab/nsp5A-B132P132LcCccTc539539B.1.617.20.00203
ORF1ab/nsp5A-B132P132PccCccT523532B.1.617.20.001969
ORF1ab/nsp5A-B132P132PccCccA9532B.1.617.20.000034
ORF1ab/nsp5A-B132P132PccCccT522526AY.250.00314
ORF1ab/nsp5A-B132P132PccCccA4526AY.250.000024
ORF1ab/nsp5A-B132P132PccCccT523523B.1.5820.256624
ORF1ab/nsp5A-B132P132LcCccTc468468B.1.1.70.000419
ORF1ab/nsp5A-B132P132LcCccTc451451AY.40.000702
ORF1ab/nsp5A-B132P132SCccTcc417419B.1.617.20.00157
ORF1ab/nsp5A-B132P132SCcCTcA1419B.1.617.20.000004
ORF1ab/nsp5A-B132P132SCcCTcT1419B.1.617.20.000004
ORF1ab/nsp5A-B132P132HcCccAc404405All0.000077
ORF1ab/nsp5A-B132P132HcCCcAT1405All0
ORF1ab/nsp5A-B132P132PccCccT401402AY.430.001777
ORF1ab/nsp5A-B132P132PccCccA1402AY.430.000004
ORF1ab/nsp5A-B132P132PccCccT283283AY.90.019129
ORF1ab/nsp5A-B132P132LcCccTc281281B.1.5610.111552
ORF1ab/nsp5A-B132P132SCccTcc275275AY.430.001218
ORF1ab/nsp5A-B132P132PccCccT251251P.10.003954
ORF1ab/nsp5A-B132P132PccCccT242242B.1.4990.254202
ORF1ab/nsp5A-B132P132PccCccT213215B.10.001951
ORF1ab/nsp5A-B132P132PccCccA2215B.10.000018
ORF1ab/nsp5A-B132P132SCccTcc203204B.1.10.003683
ORF1ab/nsp5A-B132P132SCcCTcT1204B.1.10.000018
ORF1ab/nsp5A-B132P132SCccTcc187187B.1.177.810.035403
ORF1ab/nsp5A-B132P132SCccTcc141141AY.290.002224
ORF1ab/nsp5A-B132P132PccCccT135137B.1.20.001189
ORF1ab/nsp5A-B132P132PccCccA2137B.1.20.000018
ORF1ab/nsp5A-B132P132PccCccT123124AY.440.000749
ORF1ab/nsp5A-B132P132PccCccA1124AY.440.000006
ORF1ab/nsp5A-B132P132LcCccTc123123AY.290.00194
ORF1ab/nsp5A-B132P132HcCccAc113113R.10.010171
ORF1ab/nsp5A-B132P132LcCccTc110110AY.430.000487
ORF1ab/nsp5A-B132P132LcCccTc106106AY.1030.000658
ORF1ab/nsp5A-B132P132SCccTcc104104B.1.20.000916
ORF1ab/nsp5A-B132P132LcCccTc103103B.1.20.000907
ORF1ab/nsp5A-B132P132PccCccT93101AY.1020.002466
ORF1ab/nsp5A-B132P132PccCccA8101AY.1020.000212
ORF1ab/nsp5A-B132P132PccCccT9899B.1.2580.006522
ORF1ab/nsp5A-B132P132PccCccA199B.1.2580.000067
ORF1ab/nsp5A-B132P132SCccTcc9898AY.1020.002598
ORF1ab/nsp5A-B132P132SCccTcc9797AS.10.92381
ORF1ab/nsp5A-B132P132HcCccAc9797AY.740.011218
ORF1ab/nsp5A-B132P132PccCccT9696AY.320.051118
ORF1ab/nsp5A-B132P132SCccTcc9393B.10.000852
ORF1ab/nsp5A-B132P132SCccTcc8989AY.1030.000553
ORF1ab/nsp5A-B132P132LcCccTc8989AY.440.000542
ORF1ab/nsp5A-B132P132PccCccT8989B.1.1.5190.003534
ORF1ab/nsp5A-B132P132LcCccTc8485B.10.000769
ORF1ab/nsp5A-B132P132LcCCcTT185B.10.000009
ORF1ab/nsp5A-B132P132SCccTcc8282AY.440.000499
ORF1ab/nsp5A-B132P132HcCccAc7979AY.40.000123
ORF1ab/nsp5A-B132P132delCCC---7777All0.000015
ORF1ab/nsp5A-B132P132SCccTcc7777AY.250.000463
ORF1ab/nsp5A-B132P132PccCccT7777AY.30.000766
ORF1ab/nsp5A-B132P132LcCccTc7676B.1.1.2210.767677
ORF1ab/nsp5A-B132P132LcCccTc7070AY.250.000421
ORF1ab/nsp5A-B132P132PccCccT6970B.1.10.001252
ORF1ab/nsp5A-B132P132PccCccA170B.1.10.000018
ORF1ab/nsp5A-B132P132SCccTcc6969AY.470.002146
ORF1ab/nsp5A-B132P132PccCccT6869B.1.4290.0016
ORF1ab/nsp5A-B132P132PccCccA169B.1.4290.000024
ORF1ab/nsp5A-B132P132PccCccT6868B.1.1.1410.136821
ORF1ab/nsp5A-B132P132SCccTcc6767B.1.466.10.482014
ORF1ab/nsp5A-B132P132SCccTcc6161B.1.1.390.031091
ORF1ab/nsp5A-B132P132PccCccT6060AY.1030.000373
ORF1ab/nsp5A-B132P132PccCccT6060B.1.2390.07326
ORF1ab/nsp5A-B132P132SCccTcc6060B.1.6100.212766
ORF1ab/nsp5A-B132P132LcCccTc5656B.1.1770.000737
ORF1ab/nsp5A-B132P132SCccTcc5555AY.390.001359
ORF1ab/nsp5A-B132P132TCccAcc5454All0.00001
ORF1ab/nsp5A-B132P132SCccTcc5353B.1.4290.001247
ORF1ab/nsp5A-B132P132PccCccT5252B.1.3510.001546
ORF1ab/nsp5A-B132P132LcCccTc5151AY.30.000507
ORF1ab/nsp5A-B132P132LcCccTc5151R.10.00459
ORF1ab/nsp5A-B132P132PccCccT4646AY.50.00095
ORF1ab/nsp5A-B132P132LcCccTc4343AY.260.001217
ORF1ab/nsp5A-B132P132LcCccTc4243B.1.10.000762
ORF1ab/nsp5A-B132P132LcCCcTT143B.1.10.000018
ORF1ab/nsp5A-B132P132LcCccTc4242AY.50.000867
ORF1ab/nsp5A-B132P132ACccGcc4040All0.000008
ORF1ab/nsp5A-B132P132ACccGcc3535AY.60.001439
ORF1ab/nsp5A-B132P132delCCC---3535AZ.20.028736
ORF1ab/nsp5A-B132P132HcCccAc3434B.1.617.20.000128
ORF1ab/nsp5A-B132P132PccCccT3133AY.390.000766
ORF1ab/nsp5A-B132P132PccCccA233AY.390.000049
ORF1ab/nsp5A-B132P132PccCccT3333AY.420.001328
ORF1ab/nsp5A-B132P132PccCccT3333B.1.1770.000435
ORF1ab/nsp5A-B132P132LcCccTc3232AY.1210.00433
ORF1ab/nsp5A-B132P132LcCccTc3232AY.98.10.00155
ORF1ab/nsp5A-B132P132LcCccTc3131AY.1130.004414
ORF1ab/nsp5A-B132P132PccCccT3131AY.260.000878
ORF1ab/nsp5A-B132P132SCccTcc2929AY.1180.001817
ORF1ab/nsp5A-B132P132SCccTcc2829AY.230.001953
ORF1ab/nsp5A-B132P132SCcCTcT129AY.230.00007
ORF1ab/nsp5A-B132P132SCccTcc2929N.100.852941
ORF1ab/nsp5A-B132P132LcCccTc2929P.10.000457
ORF1ab/nsp5A-B132P132PccCccT2727B.1.1.700.009209
ORF1ab/nsp5A-B132P132PccCccT2526AY.470.000778
ORF1ab/nsp5A-B132P132PccCccA126AY.470.000031
ORF1ab/nsp5A-B132P132LcCccTc2525AY.470.000778
ORF1ab/nsp5A-B132P132SCccTcc2525B.1.1.3160.023127
ORF1ab/nsp5A-B132P132LcCccTc2525B.1.4970.007869
ORF1ab/nsp5A-B132P132LcCccTc2525L.10.047619
ORF1ab/nsp5A-B132P132LcCccTc2424AY.1000.001104
ORF1ab/nsp5A-B132P132PccCccT2424AY.290.000379
ORF1ab/nsp5A-B132P132PccCccT2424AY.39.10.000951
ORF1ab/nsp5A-B132P132SCccTcc2424C.30.10.161074
ORF1ab/nsp5A-B132P132SCccTcc2323AY.980.001817
ORF1ab/nsp5A-B132P132PccCccT2323B.1.1.10.007514
ORF1ab/nsp5A-B132P132SCccTcc2222AY.1000.001012
ORF1ab/nsp5A-B132P132SCccTcc2222AY.1210.002977
ORF1ab/nsp5A-B132P132LcCccTc2222B.1.2430.001531
ORF1ab/nsp5A-B132P132PccCccT2121AY.1190.000741
ORF1ab/nsp5A-B132P132PccCccT2121AY.360.003112
ORF1ab/nsp5A-B132P132LcCccTc2121B.1.1600.000655
ORF1ab/nsp5A-B132P132HcCccAc2020B.1.1.280.006225
ORF1ab/nsp5A-B132P132PccCccT1919A.280.050265
ORF1ab/nsp5A-B132P132PccCccT1919AY.1000.000874
ORF1ab/nsp5A-B132P132SCccTcc1919AY.200.000738
ORF1ab/nsp5A-B132P132PccCccT1919AY.3.10.00162
ORF1ab/nsp5A-B132P132SCccTcc1919AY.50.000392
ORF1ab/nsp5A-B132P132SCccTcc1919B.1.36.290.009829
ORF1ab/nsp5A-B132P132SCccTcc1818AY.30.000179
ORF1ab/nsp5A-B132P132PccCccT1818AY.46.40.002961
ORF1ab/nsp5A-B132P132SCccTcc1818B.1.177.170.014778
ORF1ab/nsp5A-B132P132SCccTcc1818P.10.000284
ORF1ab/nsp5A-B132P132TCccAcc1717AY.440.000103
ORF1ab/nsp5A-B132P132SCccTcc1717B.1.1.3170.006999
ORF1ab/nsp5A-B132P132LcCccTc1717B.1.4270.000858
ORF1ab/nsp5A-B132P132PccCccT1616AY.200.000622
ORF1ab/nsp5A-B132P132LcCccTc1616AY.660.017112
ORF1ab/nsp5A-B132P132delCCC---1616B.1.1.70.000014
ORF1ab/nsp5A-B132P132LcCccTc1616B.1.4290.000376
ORF1ab/nsp5A-B132P132SCccTcc1616B.1.5960.001394
ORF1ab/nsp5A-B132P132PccCccT1616B.1.6370.001169
ORF1ab/nsp5A-B132P132PccCccT1616C.370.001857
ORF1ab/nsp5A-B132P132LcCccTc1515B.1.1.3710.15625
ORF1ab/nsp5A-B132P132LcCccTc1414AY.1060.004689
ORF1ab/nsp5A-B132P132SCccTcc1414AY.1170.001183
ORF1ab/nsp5A-B132P132PccCccT1414AY.270.000906
ORF1ab/nsp5A-B132P132LcCccTc1414AY.4.20.000304
ORF1ab/nsp5A-B132P132SCccTcc1414B.1.1.2840.001504
ORF1ab/nsp5A-B132P132PccCccT1414B.1.2210.000994
ORF1ab/nsp5A-B132P132PccCccT1414B.1.360.002043
ORF1ab/nsp5A-B132P132SCccTcc1414B.1.360.002043
ORF1ab/nsp5A-B132P132SCccTcc1314B.1.5260.000306
ORF1ab/nsp5A-B132P132SCcCTcT114B.1.5260.000024
ORF1ab/nsp5A-B132P132SCccTcc1414P.1.150.003253
ORF1ab/nsp5A-B132P132LcCccTc1313AY.1180.000814
ORF1ab/nsp5A-B132P132SCccTcc1313AY.260.000368
ORF1ab/nsp5A-B132P132PccCccT1313AY.400.012536
ORF1ab/nsp5A-B132P132SCccTcc1313AY.450.001582
ORF1ab/nsp5A-B132P132PccCccT1113B.1.1600.000343
ORF1ab/nsp5A-B132P132PccCccA213B.1.1600.000062
ORF1ab/nsp5A-B132P132SCccTcc1313B.1.177.210.000994
ORF1ab/nsp5A-B132P132LcCccTc1313B.1.258.170.001352
ORF1ab/nsp5A-B132P132PccCccT1112A0.004257
ORF1ab/nsp5A-B132P132PccCccA112A0.000387
ORF1ab/nsp5A-B132P132PccCccT1212AY.4.20.00026
ORF1ab/nsp5A-B132P132PccCccT1212AY.830.02069
ORF1ab/nsp5A-B132P132PccCccT1212B.1.1.2220.002448
ORF1ab/nsp5A-B132P132LcCccTc1212B.1.177.40.002533
ORF1ab/nsp5A-B132P132PccCccT1212B.1.6120.03183
ORF1ab/nsp5A-B132P132LcCccTc1111AY.1020.000292
ORF1ab/nsp5A-B132P132LcCccTc1111AY.1200.000409
ORF1ab/nsp5A-B132P132PccCccT1111AY.140.000968
ORF1ab/nsp5A-B132P132LcCccTc1111AY.390.000272
ORF1ab/nsp5A-B132P132LcCccTc1111AY.4.2.10.001639
ORF1ab/nsp5A-B132P132LcCccTc1111AY.9.10.000921
ORF1ab/nsp5A-B132P132PccCccT1111B.1.177.600.002403
ORF1ab/nsp5A-B132P132PccCccT1111Q.10.00139
ORF1ab/nsp5A-B132P132PccCccT910AY.1170.000761
ORF1ab/nsp5A-B132P132PccCccG110AY.1170.000085
ORF1ab/nsp5A-B132P132PccCccT1010AY.4.2.10.00149
ORF1ab/nsp5A-B132P132PccCccT1010B.1.1.2630.015576
ORF1ab/nsp5A-B132P132LcCccTc1010B.1.2210.00071
ORF1ab/nsp5A-B132P132LcCccTc1010B.1.2340.001319
ORF1ab/nsp5A-B132P132PccCccT1010B.1.6090.004794
ORF1ab/nsp5A-B132P132PccCccT1010P.1.120.00484
ORF1ab/nsp5A-B132P132PccCccT99AY.1040.017857
ORF1ab/nsp5A-B132P132LcCccTc99AY.420.000362
ORF1ab/nsp5A-B132P132HcCccAc99AY.440.000055
ORF1ab/nsp5A-B132P132SCccTcc99AY.98.10.000436
ORF1ab/nsp5A-B132P132PccCccT99B.1.177.350.00622
ORF1ab/nsp5A-B132P132TCccAcc99B.1.2340.001187
ORF1ab/nsp5A-B132P132PccCccT99B.1.36.290.004656
ORF1ab/nsp5A-B132P132LcCccTc99B.1.5510.011613
ORF1ab/nsp5A-B132P132PccCccT99B.1.617.10.001161
ORF1ab/nsp5A-B132P132PccCccT79B.1.6210.00062
ORF1ab/nsp5A-B132P132PccCccA29B.1.6210.000177
ORF1ab/nsp5A-B132P132LcCccTc88AY.480.003721
ORF1ab/nsp5A-B132P132PccCccT88AY.60.000329
ORF1ab/nsp5A-B132P132PccCccT88AY.750.000448
ORF1ab/nsp5A-B132P132LcCccTc88B.1.1.2220.001632
ORF1ab/nsp5A-B132P132HcCccAc88B.1.1.70.000007
ORF1ab/nsp5A-B132P132PccCccT88B.1.258.170.000832
ORF1ab/nsp5A-B132P132PccCccT88B.1.4270.000404
ORF1ab/nsp5A-B132P132PccCccT78B.1.5960.00061
ORF1ab/nsp5A-B132P132PccCccA18B.1.5960.000087
ORF1ab/nsp5A-B132P132PccCccA58P.1.140.000239
ORF1ab/nsp5A-B132P132PccCccT38P.1.140.000143
ORF1ab/nsp5A-B132P132SCccTcc77AY.270.000453
ORF1ab/nsp5A-B132P132HcCccAc77AY.430.000031
ORF1ab/nsp5A-B132P132SCccTcc77AY.610.000733
ORF1ab/nsp5A-B132P132PccCccT77AY.610.000733
ORF1ab/nsp5A-B132P132PccCccT77AY.700.00146
ORF1ab/nsp5A-B132P132LcCccTc77AY.750.000392
ORF1ab/nsp5A-B132P132PccCccT77AY.950.005327
ORF1ab/nsp5A-B132P132PccCccT77AY.99.20.000645
ORF1ab/nsp5A-B132P132PccCccT67B0.000767
ORF1ab/nsp5A-B132P132PccCccA17B0.000128
ORF1ab/nsp5A-B132P132PccCccT77B.1.1.2160.006233
ORF1ab/nsp5A-B132P132SCccTcc77B.1.1.2250.05036
ORF1ab/nsp5A-B132P132LcCccTc77B.1.1.250.00398
ORF1ab/nsp5A-B132P132LcCccTc77B.1.1.2980.006034
ORF1ab/nsp5A-B132P132PccCccT77B.1.1.630.002701
ORF1ab/nsp5A-B132P132SCccTcc77B.1.177.320.009447
ORF1ab/nsp5A-B132P132SCccTcc77B.1.177.600.001529
ORF1ab/nsp5A-B132P132PccCccA57B.1.2400.001078
ORF1ab/nsp5A-B132P132PccCccT27B.1.2400.000431
ORF1ab/nsp5A-B132P132PccCccT77B.1.4510.057377
ORF1ab/nsp5A-B132P132SCccTcc77B.1.930.006536
ORF1ab/nsp5A-B132P132PccCccT77P.20.001306
ORF1ab/nsp5A-B132P132SCccTcc66A.210.01662
ORF1ab/nsp5A-B132P132SCccTcc66AG.10.4
ORF1ab/nsp5A-B132P132SCccTcc66AY.1100.000676
ORF1ab/nsp5A-B132P132PccCccT66AY.1110.001099
ORF1ab/nsp5A-B132P132LcCccTc66AY.1190.000212
ORF1ab/nsp5A-B132P132SCccTcc66AY.1190.000212
ORF1ab/nsp5A-B132P132PccCccT66AY.1200.000223
ORF1ab/nsp5A-B132P132PccCccT66AY.1210.000812
ORF1ab/nsp5A-B132P132PccCccT66AY.230.000418
ORF1ab/nsp5A-B132P132LcCccTc66AY.540.000572
ORF1ab/nsp5A-B132P132SCccTcc66AY.9.10.000502
ORF1ab/nsp5A-B132P132LcCccTc66AY.930.001638
ORF1ab/nsp5A-B132P132PccCccT66AY.98.10.000291
ORF1ab/nsp5A-B132P132PccCccT66B.1.1.1760.002636
ORF1ab/nsp5A-B132P132PccCccT66B.1.1.1890.009077
ORF1ab/nsp5A-B132P132LcCccTc66B.1.1.1890.009077
ORF1ab/nsp5A-B132P132SCccTcc66B.1.1.250.003411
ORF1ab/nsp5A-B132P132PccCccT56B.1.1.280.001556
ORF1ab/nsp5A-B132P132PccCccG16B.1.1.280.000311
ORF1ab/nsp5A-B132P132LcCccTc66B.1.1.330.002525
ORF1ab/nsp5A-B132P132LcCccTc66B.1.1.5190.000238
ORF1ab/nsp5A-B132P132LcCccTc66B.1.2320.003224
ORF1ab/nsp5A-B132P132SCccTcc66B.1.3510.000178
ORF1ab/nsp5A-B132P132PccCccT66B.1.3690.001711
ORF1ab/nsp5A-B132P132LcCccTc66B.1.5250.000679
ORF1ab/nsp5A-B132P132LcCccTc66B.1.5650.004862
ORF1ab/nsp5A-B132P132SCccTcc66Q.30.00087
ORF1ab/nsp5A-B132P132HcCccAc55AY.1030.000031
ORF1ab/nsp5A-B132P132LcCccTc55AY.200.000194
ORF1ab/nsp5A-B132P132PccCccT45AY.240.001724
ORF1ab/nsp5A-B132P132PccCccA15AY.240.000431
ORF1ab/nsp5A-B132P132LcCccTc55AY.4.50.000537
ORF1ab/nsp5A-B132P132SCccTcc55AY.420.000201
ORF1ab/nsp5A-B132P132LcCccTc55AY.5.10.018797
ORF1ab/nsp5A-B132P132PccCccT55AY.5.30.001687
ORF1ab/nsp5A-B132P132LcCccTc55AY.980.000395
ORF1ab/nsp5A-B132P132PccCccT55B.1.1.1920.011547
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1.330.002104
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1.3680.015432
ORF1ab/nsp5A-B132P132PccCccT55B.1.1.500.003394
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1.5190.000199
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1110.005875
ORF1ab/nsp5A-B132P132SCccTcc55B.1.177.630.013514
ORF1ab/nsp5A-B132P132LcCccTc55B.1.177.80.003762
ORF1ab/nsp5A-B132P132SCccTcc55B.1.258.170.00052
ORF1ab/nsp5A-B132P132SCccTcc55B.1.3110.001373
ORF1ab/nsp5A-B132P132LcCccTc55B.1.3190.015244
ORF1ab/nsp5A-B132P132LcCccTc55B.1.360.00073
ORF1ab/nsp5A-B132P132LcCccTc55B.1.36.170.00247
ORF1ab/nsp5A-B132P132LcCccTc55B.1.36.80.005
ORF1ab/nsp5A-B132P132TCccAcc55B.1.4290.000118
ORF1ab/nsp5A-B132P132SCcCTcT55B.1.4990.005252
ORF1ab/nsp5A-B132P132SCccTcc55B.1.5750.001517
ORF1ab/nsp5A-B132P132LcCccTc45C.370.000464
ORF1ab/nsp5A-B132P132LcCCcTT15C.370.000116
ORF1ab/nsp5A-B132P132PccCccT55L.30.01773
ORF1ab/nsp5A-B132P132LcCccTc55P.1.170.000809
ORF1ab/nsp5A-B132P132LcCccTc55P.20.000933
ORF1ab/nsp5A-B132P132LcCccTc55Q.80.000825
ORF1ab/nsp5A-B132P132PccCccT55Q.80.000825
ORF1ab/nsp5A-B132P132SCccTcc55Q.80.000825
ORF1ab/nsp5A-B132P132PccCccT55R.10.00045
ORF1ab/nsp5A-B132P132delCCC---440.222222
ORF1ab/nsp5A-B132P132del1Ccc-cc34All0.000001
ORF1ab/nsp5A-B132P132del1CcCGc-14All0
ORF1ab/nsp5A-B132P132SCccTcc44AY.1060.00134
ORF1ab/nsp5A-B132P132SCccTcc44AY.1110.000733
ORF1ab/nsp5A-B132P132PccCccT44AY.1140.000924
ORF1ab/nsp5A-B132P132PccCccT44AY.1180.000251
ORF1ab/nsp5A-B132P132SCccTcc44AY.1200.000149
ORF1ab/nsp5A-B132P132SCccTcc44AY.3.10.000341
ORF1ab/nsp5A-B132P132SCccTcc44AY.330.000267
ORF1ab/nsp5A-B132P132LcCccTc44AY.340.000388
ORF1ab/nsp5A-B132P132SCccTcc44AY.350.000932
ORF1ab/nsp5A-B132P132PccCccT44AY.380.001997
ORF1ab/nsp5A-B132P132delCCC---44AY.40.000006
ORF1ab/nsp5A-B132P132PccCccT44AY.460.000416
ORF1ab/nsp5A-B132P132LcCccTc44AY.46.30.003735
ORF1ab/nsp5A-B132P132SCccTcc44AY.5.40.001107
ORF1ab/nsp5A-B132P132SCccTcc44AY.540.000381
ORF1ab/nsp5A-B132P132LcCccTc44AY.60.000165
ORF1ab/nsp5A-B132P132PccCccT44AY.640.002381
ORF1ab/nsp5A-B132P132LcCccTc44AY.740.000463
ORF1ab/nsp5A-B132P132PccCccT44AY.75.10.000721
ORF1ab/nsp5A-B132P132LcCccTc44AY.840.00175
ORF1ab/nsp5A-B132P132PccCccT44AY.9.20.000147
ORF1ab/nsp5A-B132P132PccCccT44AY.980.000316
ORF1ab/nsp5A-B132P132HcCccAc34B.10.000027
ORF1ab/nsp5A-B132P132HcCCcAT14B.10.000009
ORF1ab/nsp5A-B132P132PccCccT44B.1.1.1280.028369
ORF1ab/nsp5A-B132P132LcCccTc44B.1.1.2140.000222
ORF1ab/nsp5A-B132P132SCccTcc44B.1.1.2140.000222
ORF1ab/nsp5A-B132P132LcCccTc44B.1.1.3060.001754
ORF1ab/nsp5A-B132P132PccCccT44B.1.1.3180.001207
ORF1ab/nsp5A-B132P132LcCccTc44B.1.1.3370.014388
ORF1ab/nsp5A-B132P132PccCccT44B.1.1.370.000771
ORF1ab/nsp5A-B132P132LcCccTc44B.1.1.4040.063492
ORF1ab/nsp5A-B132P132TCccAcc44B.1.1.70.000004
ORF1ab/nsp5A-B132P132ACccGcc44B.1.1.70.000004
ORF1ab/nsp5A-B132P132PccCccT44B.1.214.10.08
ORF1ab/nsp5A-B132P132SCccTcc44B.1.2340.000528
ORF1ab/nsp5A-B132P132LcCccTc44B.1.2390.004884
ORF1ab/nsp5A-B132P132LcCccTc44B.1.2410.003247
ORF1ab/nsp5A-B132P132PccCccT44B.1.36.310.007005
ORF1ab/nsp5A-B132P132SCccTcc44B.1.3960.002823
ORF1ab/nsp5A-B132P132SCccTcc44B.1.4270.000202
ORF1ab/nsp5A-B132P132LcCccTc44B.1.466.20.001565
ORF1ab/nsp5A-B132P132LcCccTc44B.1.5260.000094
ORF1ab/nsp5A-B132P132PccCccT44B.1.5580.018265
ORF1ab/nsp5A-B132P132PccCccT44B.1.5650.003241
ORF1ab/nsp5A-B132P132PccCccT44B.1.5750.001214
ORF1ab/nsp5A-B132P132PccCccT44B.1.5880.00364
ORF1ab/nsp5A-B132P132SCccTcc44B.1.617.10.000516
ORF1ab/nsp5A-B132P132LcCccTc44B.1.617.30.01194
ORF1ab/nsp5A-B132P132PccCccT44P.1.150.000929
ORF1ab/nsp5A-B132P132PccCccT33A.2.50.001497
ORF1ab/nsp5A-B132P132SCccTcc33A.23.10.002113
ORF1ab/nsp5A-B132P132HcCccAc33AT.10.015385
ORF1ab/nsp5A-B132P132SCccTcc33AY.1130.000427
ORF1ab/nsp5A-B132P132PccCccT33AY.120.000948
ORF1ab/nsp5A-B132P132PccCccT33AY.160.001139
ORF1ab/nsp5A-B132P132LcCccTc33AY.16.10.00141
ORF1ab/nsp5A-B132P132PccCccT33AY.16.10.00141
ORF1ab/nsp5A-B132P132SCccTcc33AY.190.003421
ORF1ab/nsp5A-B132P132LcCccTc33AY.20.001068
ORF1ab/nsp5A-B132P132LcCccTc33AY.230.000209
ORF1ab/nsp5A-B132P132LcCccTc23AY.270.000129
ORF1ab/nsp5A-B132P132LcCCcTT13AY.270.000065
ORF1ab/nsp5A-B132P132LcCccTc33AY.29.10.000662
ORF1ab/nsp5A-B132P132LcCccTc33AY.330.0002
ORF1ab/nsp5A-B132P132SCccTcc33AY.340.000291
ORF1ab/nsp5A-B132P132LcCccTc33AY.360.000445
ORF1ab/nsp5A-B132P132TCccAcc33AY.40.000005
ORF1ab/nsp5A-B132P132SCccTcc33AY.460.000312
ORF1ab/nsp5A-B132P132LcCccTc33AY.46.60.000217
ORF1ab/nsp5A-B132P132SCccTcc33AY.70.000588
ORF1ab/nsp5A-B132P132PccCccT33AY.7.10.000338
ORF1ab/nsp5A-B132P132SCccTcc33AY.700.000626
ORF1ab/nsp5A-B132P132LcCccTc33AY.75.10.000541
ORF1ab/nsp5A-B132P132PccCccT33AY.850.001282
ORF1ab/nsp5A-B132P132LcCccTc33AY.99.20.000276
ORF1ab/nsp5A-B132P132SCccTcc33AY.99.20.000276
ORF1ab/nsp5A-B132P132LcCccTc33B0.000383
ORF1ab/nsp5A-B132P132PccCccT33B.1.1.2140.000166
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1.2400.014085
ORF1ab/nsp5A-B132P132LcCccTc33B.1.1.280.000934
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1.280.000934
ORF1ab/nsp5A-B132P132PccCccT33B.1.1.2840.000322
ORF1ab/nsp5A-B132P132LcCccTc33B.1.1.3170.001235
ORF1ab/nsp5A-B132P132LcCccTc33B.1.1.3260.005282
ORF1ab/nsp5A-B132P132PccCccT33B.1.1.4200.003018
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1280.001906
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1600.000094
ORF1ab/nsp5A-B132P132LcCccTc33B.1.177.170.002463
ORF1ab/nsp5A-B132P132LcCccTc33B.1.177.600.000655
ORF1ab/nsp5A-B132P132SCccTcc33B.1.177.70.000495
ORF1ab/nsp5A-B132P132PccCccT33B.1.177.790.007026
ORF1ab/nsp5A-B132P132SCccTcc33B.1.2210.000213
ORF1ab/nsp5A-B132P132PccCccT33B.1.2430.000209
ORF1ab/nsp5A-B132P132LcCccTc33B.1.3440.02459
ORF1ab/nsp5A-B132P132LcCccTc33B.1.3510.000089
ORF1ab/nsp5A-B132P132SCccTcc33B.1.351.20.000908
ORF1ab/nsp5A-B132P132SCccTcc33B.1.3560.005181
ORF1ab/nsp5A-B132P132PccCccT33B.1.36.170.001482
ORF1ab/nsp5A-B132P132PccCccT33B.1.36.220.003623
ORF1ab/nsp5A-B132P132PccCccT33B.1.36.280.017241
ORF1ab/nsp5A-B132P132PccCccT33B.1.3660.014634
ORF1ab/nsp5A-B132P132PccCccT33B.1.3670.002377
ORF1ab/nsp5A-B132P132SCccTcc33B.1.3780.020548
ORF1ab/nsp5A-B132P132SCccTcc33B.1.438.10.000322
ORF1ab/nsp5A-B132P132SCccTcc33B.1.466.20.001174
ORF1ab/nsp5A-B132P132PccCccT33B.1.499.10.333333
ORF1ab/nsp5A-B132P132LcCccTc33B.1.5380.024194
ORF1ab/nsp5A-B132P132SCccTcc33B.1.5510.003871
ORF1ab/nsp5A-B132P132SCccTcc33B.1.5600.013889
ORF1ab/nsp5A-B132P132PccCccT33B.1.5950.000783
ORF1ab/nsp5A-B132P132LcCccTc33B.1.5960.000261
ORF1ab/nsp5A-B132P132SCccTcc33B.1.6200.002838
ORF1ab/nsp5A-B132P132SCccTcc33B.1.6210.000266
ORF1ab/nsp5A-B132P132PccCccT33B.1.6260.017143
ORF1ab/nsp5A-B132P132LcCccTc33C.160.003181
ORF1ab/nsp5A-B132P132SCccTcc33P.20.00056
ORF1ab/nsp5A-B132P132SCccTcc33P.60.009434
ORF1ab/nsp5A-B132P132LcCccTc22A.2.50.000998
ORF1ab/nsp5A-B132P132PccCccT22A.210.00554
ORF1ab/nsp5A-B132P132PccCccT22AD.20.000438
ORF1ab/nsp5A-B132P132PccCccT22AY.1060.00067
ORF1ab/nsp5A-B132P132PccCccT22AY.1130.000285
ORF1ab/nsp5A-B132P132SCccTcc22AY.1160.000574
ORF1ab/nsp5A-B132P132PccCccT22AY.1160.000574
ORF1ab/nsp5A-B132P132LcCccTc22AY.140.000176
ORF1ab/nsp5A-B132P132SCccTcc22AY.140.000176
ORF1ab/nsp5A-B132P132HcCccAc22AY.140.000176
ORF1ab/nsp5A-B132P132SCccTcc22AY.16.10.00094
ORF1ab/nsp5A-B132P132HcCccAc22AY.250.000012
ORF1ab/nsp5A-B132P132HcCccAc22AY.290.000032
ORF1ab/nsp5A-B132P132LcCccTc22AY.3.10.000171
ORF1ab/nsp5A-B132P132PccCccT12AY.300.000396
ORF1ab/nsp5A-B132P132PccCccA12AY.300.000396
ORF1ab/nsp5A-B132P132PccCccT22AY.330.000134
ORF1ab/nsp5A-B132P132PccCccT22AY.34.10.00102
ORF1ab/nsp5A-B132P132SCccTcc22AY.34.10.00102
ORF1ab/nsp5A-B132P132LcCccTc22AY.370.000632
ORF1ab/nsp5A-B132P132LcCccTc22AY.39.10.000079
ORF1ab/nsp5A-B132P132HcCccAc22AY.4.20.000043
ORF1ab/nsp5A-B132P132SCccTcc22AY.4.50.000215
ORF1ab/nsp5A-B132P132TCccAcc22AY.420.00008
ORF1ab/nsp5A-B132P132PccCccA12AY.450.000122
ORF1ab/nsp5A-B132P132PccCccT12AY.450.000122
ORF1ab/nsp5A-B132P132PccCccT22AY.46.20.001271
ORF1ab/nsp5A-B132P132PccCccT22AY.46.30.001867
ORF1ab/nsp5A-B132P132PccCccT22AY.46.50.000397
ORF1ab/nsp5A-B132P132PccCccT22AY.5.40.000553
ORF1ab/nsp5A-B132P132LcCccTc22AY.5.40.000553
ORF1ab/nsp5A-B132P132PccCccT22AY.540.000191
ORF1ab/nsp5A-B132P132PccCccT22AY.550.001835
ORF1ab/nsp5A-B132P132LcCccTc22AY.610.00021
ORF1ab/nsp5A-B132P132LcCccTc22AY.620.000871
ORF1ab/nsp5A-B132P132PccCccT22AY.650.001066
ORF1ab/nsp5A-B132P132LcCccTc22AY.690.000373
ORF1ab/nsp5A-B132P132delCCC---22AY.700.000417
ORF1ab/nsp5A-B132P132PccCccT22AY.730.001331
ORF1ab/nsp5A-B132P132SCccTcc22AY.740.000231
ORF1ab/nsp5A-B132P132SCccTcc22AY.75.10.000361
ORF1ab/nsp5A-B132P132PccCccT22AY.880.001768
ORF1ab/nsp5A-B132P132LcCccTc22AY.90.000135
ORF1ab/nsp5A-B132P132TCccAcc22AY.9.20.000073
ORF1ab/nsp5A-B132P132PccCccT22AY.900.001369
ORF1ab/nsp5A-B132P132LcCccTc22AY.990.002099
ORF1ab/nsp5A-B132P132TCccAcc22B.10.000018
ORF1ab/nsp5A-B132P132del1Ccc-cc22B.10.000018
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.2220.000408
ORF1ab/nsp5A-B132P132PccCccT22B.1.1.250.001137
ORF1ab/nsp5A-B132P132LcCccTc22B.1.1.2740.010101
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.2980.001724
ORF1ab/nsp5A-B132P132PccCccT22B.1.1.3060.000877
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.3060.000877
ORF1ab/nsp5A-B132P132PccCccT22B.1.1.3110.000716
ORF1ab/nsp5A-B132P132LcCccTc22B.1.1.3180.000604
ORF1ab/nsp5A-B132P132PccCccT22B.1.1.330.000842
ORF1ab/nsp5A-B132P132PccCccT22B.1.1.3540.008772
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.3740.004751
ORF1ab/nsp5A-B132P132PccCccT22B.1.1.390.001019
ORF1ab/nsp5A-B132P132LcCccTc22B.1.1.500.001358
ORF1ab/nsp5A-B132P132delCCC---22B.1.1.510.003436
ORF1ab/nsp5A-B132P132HcCccAc22B.1.1.5190.000079
ORF1ab/nsp5A-B132P132LcCccTc22B.1.1.540.006042
ORF1ab/nsp5A-B132P132LcCccTc22B.1.1.630.000772
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.740.008621
ORF1ab/nsp5A-B132P132PccCccT22B.1.1310.017544
ORF1ab/nsp5A-B132P132PccCccT22B.1.177.190.002861
ORF1ab/nsp5A-B132P132PccCccT22B.1.177.420.001789
ORF1ab/nsp5A-B132P132LcCccTc22B.1.177.440.001038
ORF1ab/nsp5A-B132P132PccCccT22B.1.177.730.001133
ORF1ab/nsp5A-B132P132PccCccT22B.1.177.750.002081
ORF1ab/nsp5A-B132P132PccCccT22B.1.177.810.000379
ORF1ab/nsp5A-B132P132PccCccT22B.1.177.860.000367
ORF1ab/nsp5A-B132P132HcCccAc22B.1.20.000018
ORF1ab/nsp5A-B132P132SCccTcc22B.1.2400.000431
ORF1ab/nsp5A-B132P132PccCccT22B.1.2410.001623
ORF1ab/nsp5A-B132P132LcCccTc22B.1.2580.000133
ORF1ab/nsp5A-B132P132SCccTcc22B.1.2790.001027
ORF1ab/nsp5A-B132P132PccCccA22B.1.2840.026316
ORF1ab/nsp5A-B132P132PccCccT22B.1.3110.000549
ORF1ab/nsp5A-B132P132LcCccTc22B.1.3110.000549
ORF1ab/nsp5A-B132P132LcCccTc22B.1.3200.002491
ORF1ab/nsp5A-B132P132PccCccT22B.1.351.20.000605
ORF1ab/nsp5A-B132P132PccCccT22B.1.351.50.001199
ORF1ab/nsp5A-B132P132PccCccT22B.1.36.180.00084
ORF1ab/nsp5A-B132P132LcCccTc22B.1.3690.00057
ORF1ab/nsp5A-B132P132PccCccT22B.1.4160.002538
ORF1ab/nsp5A-B132P132LcCccTc22B.1.4160.002538
ORF1ab/nsp5A-B132P132SCccTcc22B.1.4600.035714
ORF1ab/nsp5A-B132P132PccCccT22B.1.4980.040816
ORF1ab/nsp5A-B132P132HcCccAc22B.1.5090.001732
ORF1ab/nsp5A-B132P132PccCccT22B.1.5090.001732
ORF1ab/nsp5A-B132P132LcCccTc22B.1.5110.068966
ORF1ab/nsp5A-B132P132PccCccT22B.1.5730.012195
ORF1ab/nsp5A-B132P132PccCccT22B.1.5760.001813
ORF1ab/nsp5A-B132P132SCccTcc22B.1.6040.034483
ORF1ab/nsp5A-B132P132LcCccTc22B.1.6210.000177
ORF1ab/nsp5A-B132P132PccCccT22B.1.621.10.001012
ORF1ab/nsp5A-B132P132PccCccT22B.1.6230.001073
ORF1ab/nsp5A-B132P132LcCccTc22B.1.6280.000705
ORF1ab/nsp5A-B132P132PccCccT22B.1.6350.035088
ORF1ab/nsp5A-B132P132SCccTcc22B.1.6370.000146
ORF1ab/nsp5A-B132P132SCccTcc22B.120.012821
ORF1ab/nsp5A-B132P132LcCccTc22B.30.001661
ORF1ab/nsp5A-B132P132PccCccA12B.60.00091
ORF1ab/nsp5A-B132P132PccCccT12B.60.00091
ORF1ab/nsp5A-B132P132PccCccT22C.160.002121
ORF1ab/nsp5A-B132P132SCccTcc22C.320.046512
ORF1ab/nsp5A-B132P132SCccTcc22C.370.000232
ORF1ab/nsp5A-B132P132SCccTcc22D.20.00015
ORF1ab/nsp5A-B132P132PccCccT22L.10.00381
ORF1ab/nsp5A-B132P132SCccTcc22N.40.008511
ORF1ab/nsp5A-B132P132SCccTcc12N.50.001767
ORF1ab/nsp5A-B132P132SCcCTcT12N.50.001767
ORF1ab/nsp5A-B132P132PccCccT22P.1.10.000635
ORF1ab/nsp5A-B132P132PccCccT22P.1.100.000539
ORF1ab/nsp5A-B132P132SCccTcc22P.1.120.000968
ORF1ab/nsp5A-B132P132PccCccT22P.1.170.000324
ORF1ab/nsp5A-B132P132SCccTcc22P.1.20.002312
ORF1ab/nsp5A-B132P132PccCccT22Q.40.00091
ORF1ab/nsp5A-B132P132SCccTcc11A0.000387
ORF1ab/nsp5A-B132P132SCccTcc11A.10.000282
ORF1ab/nsp5A-B132P132LcCccTc11A.60.005128
ORF1ab/nsp5A-B132P132delCCC---11AD.20.000219
ORF1ab/nsp5A-B132P132LcCccTc11AE.80.000489
ORF1ab/nsp5A-B132P132SCccTcc11AE.80.000489
ORF1ab/nsp5A-B132P132QcCCcAA11All0
ORF1ab/nsp5A-B132P132RcCccGc11All0
ORF1ab/nsp5A-B132P132LcCccTc11AT.10.005128
ORF1ab/nsp5A-B132P132HcCccAc11AY.100.00053
ORF1ab/nsp5A-B132P132SCccTcc11AY.1010.00049
ORF1ab/nsp5A-B132P132del1Ccc-cc11AY.1030.000006
ORF1ab/nsp5A-B132P132LcCccTc11AY.1050.000643
ORF1ab/nsp5A-B132P132SCccTcc11AY.1070.000466
ORF1ab/nsp5A-B132P132PccCccT11AY.1080.001103
ORF1ab/nsp5A-B132P132delCCC---11AY.1080.001103
ORF1ab/nsp5A-B132P132SCccTcc11AY.1090.00074
ORF1ab/nsp5A-B132P132LcCccTc11AY.1100.000113
ORF1ab/nsp5A-B132P132PccCccT11AY.1100.000113
ORF1ab/nsp5A-B132P132LcCccTc11AY.1140.000231
ORF1ab/nsp5A-B132P132SCccTcc11AY.1140.000231
ORF1ab/nsp5A-B132P132LcCccTc11AY.1170.000085
ORF1ab/nsp5A-B132P132HcCccAc11AY.1170.000085
ORF1ab/nsp5A-B132P132SCccTcc11AY.120.000316
ORF1ab/nsp5A-B132P132LcCccTc11AY.120.10.000321
ORF1ab/nsp5A-B132P132SCccTcc11AY.120.2.10.000498
ORF1ab/nsp5A-B132P132PccCccT11AY.130.000161
ORF1ab/nsp5A-B132P132LcCccTc11AY.130.000161
ORF1ab/nsp5A-B132P132PccCccT11AY.190.00114
ORF1ab/nsp5A-B132P132LcCccTc11AY.240.000431
ORF1ab/nsp5A-B132P132delCCC---11AY.250.000006
ORF1ab/nsp5A-B132P132TCccAcc11AY.260.000028
ORF1ab/nsp5A-B132P132HcCccAc11AY.260.000028
ORF1ab/nsp5A-B132P132SCccTcc11AY.29.10.000221
ORF1ab/nsp5A-B132P132PccCccT11AY.29.10.000221
ORF1ab/nsp5A-B132P132ACccGcc11AY.30.00001
ORF1ab/nsp5A-B132P132SCccTcc11AY.360.000148
ORF1ab/nsp5A-B132P132SCccTcc11AY.370.000316
ORF1ab/nsp5A-B132P132SCccTcc11AY.380.000499
ORF1ab/nsp5A-B132P132LcCccTc11AY.380.000499
ORF1ab/nsp5A-B132P132TCccAcc11AY.39.10.00004
ORF1ab/nsp5A-B132P132SCccTcc11AY.39.10.00004
ORF1ab/nsp5A-B132P132SCccTcc11AY.39.1.10.000725
ORF1ab/nsp5A-B132P132SCccTcc11AY.4.20.000022
ORF1ab/nsp5A-B132P132SCccTcc11AY.4.2.10.000149
ORF1ab/nsp5A-B132P132LcCccTc11AY.4.30.000842
ORF1ab/nsp5A-B132P132TCccAcc11AY.4.50.000107
ORF1ab/nsp5A-B132P132delCCC---11AY.4.50.000107
ORF1ab/nsp5A-B132P132SCccTcc11AY.410.000294
ORF1ab/nsp5A-B132P132del1CcCGc-11AY.440.000006
ORF1ab/nsp5A-B132P132LcCccTc11AY.450.000122
ORF1ab/nsp5A-B132P132TCccAcc11AY.450.000122
ORF1ab/nsp5A-B132P132LcCccTc11AY.460.000104
ORF1ab/nsp5A-B132P132PccCccT11AY.46.10.001027
ORF1ab/nsp5A-B132P132HcCccAc11AY.46.10.001027
ORF1ab/nsp5A-B132P132SCccTcc11AY.46.40.000165
ORF1ab/nsp5A-B132P132PccCccT11AY.46.60.000072
ORF1ab/nsp5A-B132P132SCccTcc11AY.46.60.000072
ORF1ab/nsp5A-B132P132HcCccAc11AY.470.000031
ORF1ab/nsp5A-B132P132SCccTcc11AY.480.000465
ORF1ab/nsp5A-B132P132PccCccT11AY.490.003195
ORF1ab/nsp5A-B132P132HcCccAc11AY.50.000021
ORF1ab/nsp5A-B132P132PccCccT11AY.5.10.003759
ORF1ab/nsp5A-B132P132PccCccT11AY.5.20.002463
ORF1ab/nsp5A-B132P132SCccTcc11AY.5.30.000337
ORF1ab/nsp5A-B132P132LcCccTc11AY.530.000288
ORF1ab/nsp5A-B132P132SCccTcc11AY.530.000288
ORF1ab/nsp5A-B132P132SCccTcc11AY.550.000917
ORF1ab/nsp5A-B132P132SCccTcc11AY.60.000041
ORF1ab/nsp5A-B132P132PccCccT11AY.630.000387
ORF1ab/nsp5A-B132P132LcCccTc11AY.630.000387
ORF1ab/nsp5A-B132P132SCccTcc11AY.640.000595
ORF1ab/nsp5A-B132P132LcCccTc11AY.650.000533
ORF1ab/nsp5A-B132P132SCccTcc11AY.660.00107
ORF1ab/nsp5A-B132P132PccCccT11AY.670.000464
ORF1ab/nsp5A-B132P132SCccTcc11AY.680.000274
ORF1ab/nsp5A-B132P132LcCccTc11AY.680.000274
ORF1ab/nsp5A-B132P132PccCccT11AY.680.000274
ORF1ab/nsp5A-B132P132PccCccT11AY.690.000187
ORF1ab/nsp5A-B132P132SCccTcc11AY.7.10.000113
ORF1ab/nsp5A-B132P132LcCccTc11AY.700.000209
ORF1ab/nsp5A-B132P132PccCccT11AY.710.000475
ORF1ab/nsp5A-B132P132LcCccTc11AY.710.000475
ORF1ab/nsp5A-B132P132delCCC---11AY.75.10.00018
ORF1ab/nsp5A-B132P132SCccTcc11AY.760.004831
ORF1ab/nsp5A-B132P132SCccTcc11AY.780.001541
ORF1ab/nsp5A-B132P132LcCccTc11AY.790.001211
ORF1ab/nsp5A-B132P132HcCccAc11AY.820.001357
ORF1ab/nsp5A-B132P132SCccTcc11AY.850.000427
ORF1ab/nsp5A-B132P132LcCccTc11AY.850.000427
ORF1ab/nsp5A-B132P132HcCccAc11AY.9.10.000084
ORF1ab/nsp5A-B132P132SCccTcc11AY.9.20.000037
ORF1ab/nsp5A-B132P132LcCccTc11AY.910.00073
ORF1ab/nsp5A-B132P132PccCccT11AY.910.00073
ORF1ab/nsp5A-B132P132SCccTcc11AY.920.000287
ORF1ab/nsp5A-B132P132SCccTcc11AY.950.000761
ORF1ab/nsp5A-B132P132PccCccT11AY.990.001049
ORF1ab/nsp5A-B132P132LcCccTc11AY.99.10.001553
ORF1ab/nsp5A-B132P132PccCccT11AY.99.10.001553
ORF1ab/nsp5A-B132P132SCccTcc11AZ.50.003509
ORF1ab/nsp5A-B132P132SCccTcc11B0.000128
ORF1ab/nsp5A-B132P132QcCCcAA11B.10.000009
ORF1ab/nsp5A-B132P132delCCC---11B.10.000009
ORF1ab/nsp5A-B132P132TCccAcc11B.1.10.000018
ORF1ab/nsp5A-B132P132HcCccAc11B.1.10.000018
ORF1ab/nsp5A-B132P132RcCccGc11B.1.10.000018
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.10.000327
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.1180.010204
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.1410.002012
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.1480.008772
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.1710.003676
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.1760.000439
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.2030.016949
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.2050.003717
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2160.00089
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.2260.005814
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.2360.006897
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2630.001558
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.2630.001558
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.2690.001353
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.2720.005208
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.2750.011236
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.2860.002899
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.2890.002083
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2910.000742
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2970.002237
ORF1ab/nsp5A-B132P132HcCccAc11B.1.1.3060.000438
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.3110.000358
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.3120.001912
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.3370.003597
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.3440.010753
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.3490.010309
ORF1ab/nsp5A-B132P132TCccAcc11B.1.1.3540.004386
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.3540.004386
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.3690.000446
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.3690.000446
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.370.000193
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.3720.000689
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.3720.000689
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.3770.001381
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.3850.004464
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.390.00051
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.3970.002252
ORF1ab/nsp5A-B132P132delCCC---11B.1.1.4090.002833
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4090.002833
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4160.000905
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4330.001425
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1.4640.001473
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4860.001577
ORF1ab/nsp5A-B132P132PccCccT11B.1.1.5210.005348
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.5260.003546
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.630.000386
ORF1ab/nsp5A-B132P132PccCccT11B.1.1100.004525
ORF1ab/nsp5A-B132P132PccCccT11B.1.110.30.000718
ORF1ab/nsp5A-B132P132LcCccTc11B.1.110.30.000718
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1190.010526
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1260.001276
ORF1ab/nsp5A-B132P132SCccTcc11B.1.130.002375
ORF1ab/nsp5A-B132P132PccCccT11B.1.1390.000733
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1390.000733
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1420.002899
ORF1ab/nsp5A-B132P132PccCccT11B.1.1430.021277
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1460.004237
ORF1ab/nsp5A-B132P132LcCccTc11B.1.1470.000756
ORF1ab/nsp5A-B132P132PccCccT11B.1.1490.003425
ORF1ab/nsp5A-B132P132PccCccT11B.1.1570.002985
ORF1ab/nsp5A-B132P132SCccTcc11B.1.160.240.004425
ORF1ab/nsp5A-B132P132LcCccTc11B.1.160.290.004219
ORF1ab/nsp5A-B132P132PccCccT11B.1.160.90.007194
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1670.007812
ORF1ab/nsp5A-B132P132HcCccAc11B.1.1770.000013
ORF1ab/nsp5A-B132P132delCCC---11B.1.1770.000013
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.120.000152
ORF1ab/nsp5A-B132P132SCccTcc11B.1.177.180.00116
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.210.000076
ORF1ab/nsp5A-B132P132delCCC---11B.1.177.40.000211
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.440.000519
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.450.000381
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.510.004566
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.520.001757
ORF1ab/nsp5A-B132P132LcCccTc11B.1.177.520.001757
ORF1ab/nsp5A-B132P132LcCccTc11B.1.177.530.002392
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.570.000281
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.60.000977
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.70.000165
ORF1ab/nsp5A-B132P132TCccAcc11B.1.177.730.000566
ORF1ab/nsp5A-B132P132SCccTcc11B.1.177.790.002342
ORF1ab/nsp5A-B132P132PccCccT11B.1.177.80.000752
ORF1ab/nsp5A-B132P132LcCccTc11B.1.177.860.000183
ORF1ab/nsp5A-B132P132LcCccTc11B.1.177.880.012346
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1800.05
ORF1ab/nsp5A-B132P132TCccAcc11B.1.20.000009
ORF1ab/nsp5A-B132P132PccCccT11B.1.2060.000816
ORF1ab/nsp5A-B132P132LcCccTc11B.1.2060.000816
ORF1ab/nsp5A-B132P132SCccTcc11B.1.2100.002132
ORF1ab/nsp5A-B132P132PccCccT11B.1.2140.003663
ORF1ab/nsp5A-B132P132SCccTcc11B.1.220.001318
ORF1ab/nsp5A-B132P132SCccTcc11B.1.2230.002778
ORF1ab/nsp5A-B132P132PccCccT11B.1.2320.000537
ORF1ab/nsp5A-B132P132PccCccT11B.1.2340.000132
ORF1ab/nsp5A-B132P132LcCccTc11B.1.2400.000216
ORF1ab/nsp5A-B132P132PccCccT11B.1.243.10.022222
ORF1ab/nsp5A-B132P132PccCccT11B.1.258.110.000396
ORF1ab/nsp5A-B132P132PccCccT11B.1.258.140.00098
ORF1ab/nsp5A-B132P132PccCccT11B.1.258.30.001675
ORF1ab/nsp5A-B132P132PccCccT11B.1.258.60.019608
ORF1ab/nsp5A-B132P132PccCccT11B.1.2640.012346
ORF1ab/nsp5A-B132P132PccCccT11B.1.2790.000514
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3010.005917
ORF1ab/nsp5A-B132P132PccCccT11B.1.3200.001245
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3440.008197
ORF1ab/nsp5A-B132P132LcCccTc11B.1.351.20.000303
ORF1ab/nsp5A-B132P132SCccTcc11B.1.351.30.000876
ORF1ab/nsp5A-B132P132PccCccT11B.1.351.30.000876
ORF1ab/nsp5A-B132P132SCccTcc11B.1.351.50.0006
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3570.009524
ORF1ab/nsp5A-B132P132LcCccTc11B.1.36.10.00114
ORF1ab/nsp5A-B132P132PccCccT11B.1.36.160.001425
ORF1ab/nsp5A-B132P132delCCC---11B.1.36.170.000494
ORF1ab/nsp5A-B132P132SCccTcc11B.1.36.180.00042
ORF1ab/nsp5A-B132P132LcCccTc11B.1.36.220.001208
ORF1ab/nsp5A-B132P132LcCccTc11B.1.36.290.000517
ORF1ab/nsp5A-B132P132SCccTcc11B.1.36.70.004
ORF1ab/nsp5A-B132P132PccCccT11B.1.36.80.001
ORF1ab/nsp5A-B132P132SCccTcc11B.1.36.80.001
ORF1ab/nsp5A-B132P132LcCccTc11B.1.3610.001289
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3690.000285
ORF1ab/nsp5A-B132P132PccCccT11B.1.3890.001002
ORF1ab/nsp5A-B132P132PccCccT11B.1.3930.028571
ORF1ab/nsp5A-B132P132PccCccT11B.1.3960.000706
ORF1ab/nsp5A-B132P132PccCccT11B.1.3980.002976
ORF1ab/nsp5A-B132P132LcCccTc11B.1.3980.002976
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4000.000429
ORF1ab/nsp5A-B132P132LcCccTc11B.1.4000.000429
ORF1ab/nsp5A-B132P132PccCccT11B.1.4030.003268
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4050.012346
ORF1ab/nsp5A-B132P132PccCccT11B.1.4080.00369
ORF1ab/nsp5A-B132P132LcCccTc11B.1.4090.000781
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4130.004255
ORF1ab/nsp5A-B132P132delCCC---11B.1.4150.014286
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4160.001269
ORF1ab/nsp5A-B132P132PccCccT11B.1.4240.008065
ORF1ab/nsp5A-B132P132LcCccTc11B.1.4560.003268
ORF1ab/nsp5A-B132P132PccCccT11B.1.4560.003268
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4660.023256
ORF1ab/nsp5A-B132P132PccCccT11B.1.466.20.000391
ORF1ab/nsp5A-B132P132LcCccTc11B.1.4930.025641
ORF1ab/nsp5A-B132P132LcCccTc11B.1.4990.00105
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5160.001957
ORF1ab/nsp5A-B132P132PccCccT11B.1.5170.000427
ORF1ab/nsp5A-B132P132PccCccT11B.1.5270.003704
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5270.003704
ORF1ab/nsp5A-B132P132LcCccTc11B.1.5600.00463
ORF1ab/nsp5A-B132P132PccCccT11B.1.5600.00463
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5610.000397
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5640.000426
ORF1ab/nsp5A-B132P132LcCccTc11B.1.5640.000426
ORF1ab/nsp5A-B132P132PccCccT11B.1.564.10.001577
ORF1ab/nsp5A-B132P132SCcCTcT11B.1.5680.001111
ORF1ab/nsp5A-B132P132LcCccTc11B.1.5750.000303
ORF1ab/nsp5A-B132P132SCccTcc11B.1.575.10.002439
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5760.000907
ORF1ab/nsp5A-B132P132PccCccT11B.1.5770.000687
ORF1ab/nsp5A-B132P132PccCccT11B.1.5800.004065
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5870.001898
ORF1ab/nsp5A-B132P132LcCccTc11B.1.5950.000261
ORF1ab/nsp5A-B132P132SCccTcc11B.1.595.10.005848
ORF1ab/nsp5A-B132P132delCCC---11B.1.5960.000087
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5970.00463
ORF1ab/nsp5A-B132P132PccCccT11B.1.6060.006024
ORF1ab/nsp5A-B132P132LcCccTc11B.1.6090.000479
ORF1ab/nsp5A-B132P132TCccAcc11B.1.617.20.000004
ORF1ab/nsp5A-B132P132delCCC---11B.1.617.20.000004
ORF1ab/nsp5A-B132P132LcCccTc11B.1.6180.004032
ORF1ab/nsp5A-B132P132PccCccT11B.1.619.10.000641
ORF1ab/nsp5A-B132P132TCccAcc11B.1.6210.000089
ORF1ab/nsp5A-B132P132LcCccTc11B.1.621.10.000506
ORF1ab/nsp5A-B132P132PccCccA11B.1.6280.000352
ORF1ab/nsp5A-B132P132PccCccT11B.1.6310.003367
ORF1ab/nsp5A-B132P132LcCccTc11B.1.6370.000073
ORF1ab/nsp5A-B132P132LcCccTc11B.1.80.001972
ORF1ab/nsp5A-B132P132SCccTcc11B.1.80.001972
ORF1ab/nsp5A-B132P132LcCccTc11B.1.88.10.004808
ORF1ab/nsp5A-B132P132PccCccT11B.1.9.50.005682
ORF1ab/nsp5A-B132P132SCccTcc11B.30.000831
ORF1ab/nsp5A-B132P132SCccTcc11B.310.003731
ORF1ab/nsp5A-B132P132PccCccT11B.400.000364
ORF1ab/nsp5A-B132P132LcCccTc11B.520.010101
ORF1ab/nsp5A-B132P132SCccTcc11B.550.00295
ORF1ab/nsp5A-B132P132LcCccTc11B.60.00091
ORF1ab/nsp5A-B132P132PccCccT11B.6.60.000889
ORF1ab/nsp5A-B132P132LcCccTc11B.6.80.008264
ORF1ab/nsp5A-B132P132PccCccT11B.610.005747
ORF1ab/nsp5A-B132P132PccCccT11C.10.002392
ORF1ab/nsp5A-B132P132LcCccTc11C.130.025641
ORF1ab/nsp5A-B132P132PccCccT11C.350.000774
ORF1ab/nsp5A-B132P132HcCccAc11C.350.000774
ORF1ab/nsp5A-B132P132LcCccTc11C.36.10.004149
ORF1ab/nsp5A-B132P132SCccTcc11C.36.30.000567
ORF1ab/nsp5A-B132P132LcCccTc11C.40.01
ORF1ab/nsp5A-B132P132LcCccTc11D.20.000075
ORF1ab/nsp5A-B132P132PccCccT11D.20.000075
ORF1ab/nsp5A-B132P132delCCC---11N.40.004255
ORF1ab/nsp5A-B132P132LcCccTc11N.50.001767
ORF1ab/nsp5A-B132P132PccCccT11N.60.007092
ORF1ab/nsp5A-B132P132PccCccT11N.90.005952
ORF1ab/nsp5A-B132P132SCccTcc11P.1.140.000048
ORF1ab/nsp5A-B132P132LcCccTc11P.1.150.000232
ORF1ab/nsp5A-B132P132SCccTcc11P.1.170.000162
ORF1ab/nsp5A-B132P132PccCccT11P.1.20.001156
ORF1ab/nsp5A-B132P132PccCccT11P.1.50.076923
ORF1ab/nsp5A-B132P132SCccTcc11P.1.60.001946
ORF1ab/nsp5A-B132P132SCccTcc11P.30.001595
ORF1ab/nsp5A-B132P132SCccTcc11Q.20.000613
ORF1ab/nsp5A-B132P132SCccTcc11R.10.00009