CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp5A-B | 121 | S121L | S3384L | nonsyn | tCa | tTa | 1209 | 1206 | 0.997519 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121L | S3384L | nonsyn | TCa | CTa | 1209 | 2 | 0.00165426 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121L | S3384L | nonsyn | TCA | CTT | 1209 | 1 | 0.00082713 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121S | S3384S | syn | tcA | tcG | 768 | 448 | 0.583333 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121S | S3384S | syn | tcA | tcT | 768 | 315 | 0.410156 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121S | S3384S | syn | tcA | tcC | 768 | 5 | 0.00651042 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121A | S3384A | nonsyn | Tca | Gca | 24 | 24 | 1 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121X | S3384X | nonsyn | tCa | tAa | 18 | 18 | 1 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121del | S3384del | del | TCA | --- | 18 | 18 | 1 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121T | S3384T | nonsyn | Tca | Aca | 15 | 15 | 1 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121P | S3384P | nonsyn | Tca | Cca | 3 | 2 | 0.666667 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121P | S3384P | nonsyn | TcA | CcT | 3 | 1 | 0.333333 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121del1 | S3384del1 | del | tCa | t-a | 2 | 2 | 1 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121del2 | S3384del2 | del | TCA | --T | 1 | 1 | 1 | 10415-10417 |
ORF1ab/nsp5A-B | 121 | S121F | S3384F | nonsyn | tCA | tTT | 1 | 1 | 1 | 10415-10417 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1206 | 1209 | All | 0.000231 |
ORF1ab/nsp5A-B | 121 | S121L | TCa | CTa | 2 | 1209 | All | 0 |
ORF1ab/nsp5A-B | 121 | S121L | TCA | CTT | 1 | 1209 | All | 0 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 448 | 768 | All | 0.000086 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 315 | 768 | All | 0.00006 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcC | 5 | 768 | All | 0.000001 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 356 | 356 | B.1.429 | 0.008376 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 296 | 308 | B.1 | 0.002711 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 11 | 308 | B.1 | 0.000101 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcC | 1 | 308 | B.1 | 0.000009 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 256 | 256 | AY.4 | 0.000398 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 222 | 222 | AY.43 | 0.000984 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 185 | 185 | B.1.1.7 | 0.000166 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 174 | 174 | B.1.626 | 0.994286 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 36 | 37 | B.1.617.2 | 0.000136 |
ORF1ab/nsp5A-B | 121 | S121L | TCa | CTa | 1 | 37 | B.1.617.2 | 0.000004 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 27 | 27 | B.1.160 | 0.000842 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 27 | 27 | B.1.621 | 0.00239 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 24 | 24 | All | 0.000005 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 22 | 22 | AY.25 | 0.000132 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 20 | 20 | AY.3 | 0.000199 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 20 | 20 | B.1.1.297 | 0.044743 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 18 | 18 | All | 0.000003 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 18 | 18 | All | 0.000003 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 16 | 16 | B.1 | 0.000147 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 15 | 15 | All | 0.000003 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 14 | 15 | AY.4 | 0.000022 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcC | 1 | 15 | AY.4 | 0.000002 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 14 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcC | 1 | 15 | B.1.1.7 | 0.000001 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 13 | 13 | C.37 | 0.001509 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 12 | 12 | AY.26 | 0.00034 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 11 | 11 | AY.23.1 | 0.004591 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 10 | 10 | AY.20 | 0.000389 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 10 | 10 | B.1.258 | 0.000665 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 10 | 10 | B.1.582 | 0.004907 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 8 | 8 | A.1 | 0.002255 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 8 | 8 | B.1.2 | 0.00007 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 8 | 8 | P.1 | 0.000126 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 7 | 7 | AY.103 | 0.000043 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 6 | 7 | B.1.617.2 | 0.000023 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcC | 1 | 7 | B.1.617.2 | 0.000004 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 6 | 6 | AY.102 | 0.000159 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 6 | 6 | B.1.427 | 0.000303 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 6 | 6 | B.1.609 | 0.002876 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 5 | 5 | AY.39.1 | 0.000198 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 5 | 5 | AY.4.2 | 0.000108 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 4 | 5 | B.1.2 | 0.000035 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 5 | B.1.2 | 0.000009 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 5 | 5 | B.1.258.4 | 0.017241 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 4 | 4 | 0.222222 | |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 4 | 4 | AY.47 | 0.000124 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 4 | 4 | B.1.9.5 | 0.022727 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 3 | 0.055556 | |
ORF1ab/nsp5A-B | 121 | S121L | TCa | CTa | 1 | 3 | 0.055556 | |
ORF1ab/nsp5A-B | 121 | S121L | TCA | CTT | 1 | 3 | 0.055556 | |
ORF1ab/nsp5A-B | 121 | S121P | Tca | Cca | 2 | 3 | All | 0 |
ORF1ab/nsp5A-B | 121 | S121P | TcA | CcT | 1 | 3 | All | 0 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 3 | 3 | B.1.1.241 | 0.006211 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 3 | 3 | B.1.1.351 | 0.00838 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 3 | 3 | B.1.1.385 | 0.013393 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 3 | 3 | B.1.177.60 | 0.000655 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 3 | 3 | B.1.177.83 | 0.004444 |
ORF1ab/nsp5A-B | 121 | S121P | TcA | CcT | 1 | 2 | 0.055556 | |
ORF1ab/nsp5A-B | 121 | S121P | Tca | Cca | 1 | 2 | 0.055556 | |
ORF1ab/nsp5A-B | 121 | S121del1 | tCa | t-a | 2 | 2 | All | 0 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 2 | 2 | B | 0.000256 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 2 | 2 | B.1.298 | 0.004228 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp5A-B | 121 | S121del1 | tCa | t-a | 2 | 2 | B.1.617.3 | 0.00597 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 2 | 2 | B.6 | 0.00182 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp5A-B | 121 | S121F | tCA | tTT | 1 | 1 | 0.055556 | |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 1 | 1 | 0.055556 | |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp5A-B | 121 | S121del2 | TCA | --T | 1 | 1 | All | 0 |
ORF1ab/nsp5A-B | 121 | S121F | tCA | tTT | 1 | 1 | All | 0 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 1 | 1 | B | 0.000128 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcC | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp5A-B | 121 | S121P | Tca | Cca | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.1.521 | 0.005348 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp5A-B | 121 | S121del2 | TCA | --T | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | B.1.177.2 | 0.004545 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 1 | 1 | B.1.415 | 0.014286 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | B.1.429.1 | 0.012048 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.448 | 0.002625 |
ORF1ab/nsp5A-B | 121 | S121T | Tca | Aca | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp5A-B | 121 | S121X | tCa | tAa | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcT | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | B.45 | 0.003831 |
ORF1ab/nsp5A-B | 121 | S121A | Tca | Gca | 1 | 1 | C.4 | 0.01 |
ORF1ab/nsp5A-B | 121 | S121del | TCA | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp5A-B | 121 | S121L | tCa | tTa | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp5A-B | 121 | S121S | tcA | tcG | 1 | 1 | W.1 | 0.008696 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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