CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 114 & Codon = gtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp5A-B	114	V114V	V3377V	syn	gtG	gtT	20773	20528	0.988206	10394-10396

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	20528	20773	All	0.003926
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	6778	6778	Q.3	0.983031
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3305	3305	B.1.351.2	1
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1722	1722	AY.94	0.762284
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1664	1678	AY.4	0.00259
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1141	1141	B.1.351.3	1
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	822	825	AY.44	0.005003
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	655	694	B.1.1.7	0.000586
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	611	632	B.1.617.2	0.002301
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	465	476	AY.43	0.00206
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	286	286	B.1.36.1	0.326112
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	273	278	B.1.2	0.002404
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	228	228	B.1.1.519	0.009054
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	174	183	P.1	0.002741
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	129	130	AY.25	0.000776
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	120	122	B.1	0.001099
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	112	117	AY.103	0.000695
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	112	112	AY.106	0.037508
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	105	105	B.1.351	0.003121
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	86	102	AY.3	0.000855
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	63	77	AY.102	0.00167
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	77	77	AY.121	0.010419
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	70	72	B.1.1	0.00127
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	60	60	B.1.429	0.001412
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	57	57	AY.119	0.002013
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	50	51	B.1.177	0.000658
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	41	49	AY.47	0.001275
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	49	49	B.1.1.70	0.016712
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	45	46	AY.39	0.001112
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	24	41	B.1.1.222	0.004896
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	40	40	AY.33	0.002671
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	39	39	B.1.466.2	0.015258
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	29	29	AY.46.6	0.002094
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	26	28	AY.5	0.000537
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	27	27	B.1.595	0.007046
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	27	27	C.35	0.020898
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	26	26	AY.45	0.003164
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	25	26	B.1.243	0.00174
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	25	25	B.1.621	0.002213
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	20	24	AY.100	0.00092
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	23	23	AY.117	0.001944
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	12	22	AY.4.5	0.00129
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	22	22	B.1.400	0.009438
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	21	21	B.1.160.7	0.043659
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	21	21	P.1.10	0.005659
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	18	19	AY.42	0.000724
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	18	19	AY.98.1	0.000872
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	18	18	B.1.565	0.014587
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	17	17	AY.120	0.000632
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	17	17	AY.9	0.001149
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	16	17	B.1.404	0.020833
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	15	16	AY.20	0.000583
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	16	16	B.1.1.368	0.049383
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	16	16	B.1.298	0.033827
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	16	16	B.1.617.1	0.002063
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	15	15	AY.9.2	0.000551
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	15	15	B.1.1.39	0.007645
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	15	15	B.1.526	0.000353
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	14	14	AY.114	0.003235
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	12	14	B.1.596	0.001046
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	13	13	AY.23	0.000907
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	12	12	AY.10	0.006359
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	12	12	B.1.258	0.000799
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	11	12	B.1.427	0.000555
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	10	11	AY.4.2	0.000217
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	11	11	AY.46	0.001145
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	10	10	AY.84	0.004374
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	10	10	AY.99.2	0.000922
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	10	B.1.362	0.001541
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	10	10	P.1.12	0.00484
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	9	9	A.2.5	0.004491
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	9	9	AY.29	0.000142
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	9	9	AY.90	0.00616
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	8	9	B.1.221	0.000568
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	9	9	B.1.36	0.001313
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	9	9	B.1.575	0.002731
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	7	8	AY.26	0.000198
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	8	8	B.1.1.170	0.009975
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	8	8	B.1.1.231	0.024768
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	7	8	C.37	0.000812
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	7	7	AY.113	0.000997
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	7	7	AY.118	0.000439
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	7	7	AY.6	0.000288
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	7	7	AY.61	0.000733
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	7	AY.98	0.000316
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	7	7	B.1.160	0.000218
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	6	6	B.1.36.29	0.003104
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	6	6	B.1.562	0.111111
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	6	6	B.1.630	0.031414
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	6	6	P.1.14	0.000287
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	6	P.2	0.000933
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	5	AY.105	0.002572
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	AY.120.2.1	0.002491
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	AY.34	0.000485
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	AY.46.1	0.005133
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	AY.5.4	0.001384
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	AY.92	0.001436
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	5	B.1.1.1	0.001307
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	B.1.1.269	0.006766
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	B.1.311	0.001373
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	5	5	B.1.316	0.555556
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	5	B.1.576	0.003626
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	5	Q.8	0.000495
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	AY.5.2	0.009852
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	AY.51	0.003636
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	AY.74	0.000463
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	4	AY.75.1	0.000541
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	B.1.443	0.018692
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	B.1.499	0.004202
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	B.40	0.001457
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	4	D.2	0.000225
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	N.6	0.028369
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	4	P.1.15	0.000697
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	4	4	P.1.17	0.000647
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	A.2.4	0.010101
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.14	0.000264
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.32	0.001597
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.37	0.000948
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.4.1	0.002212
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.5.3	0.001012
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.54	0.000286
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.58	0.002722
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.7.1	0.000338
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.83	0.005172
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.86	0.00249
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	AY.9.1	0.000251
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.1.216	0.002671
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.1.232	0.005445
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.1.317	0.001235
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.143	0.06383
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.160.33	0.013274
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.177.4	0.000633
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.177.52	0.005272
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.177.56	0.002003
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.234	0.000396
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.369	0.000856
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.416	0.003807
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.438.1	0.000322
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.451	0.02459
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.525	0.000339
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.554	0.013216
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.588	0.00273
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	3	3	B.1.628	0.001057
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	AY.116	0.000574
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	AY.12	0.000632
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	2	AY.16	0.00038
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	2	AY.27	0.000065
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	AY.7	0.000392
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	AY.85	0.000854
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	AY.93	0.000546
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	AZ.3	0.00304
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B	0.000256
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.1.28	0.000622
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.1.311	0.000716
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.1.329	0.007692
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.1.50	0.001358
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.1.525	0.010929
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	2	B.1.1.63	0.000386
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.177.20	0.003035
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.177.21	0.000153
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.177.81	0.000379
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.214.2	0.001199
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.319	0.006098
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.538	0.016129
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.561	0.000794
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.564	0.000852
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.574	0.004301
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.618	0.008065
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.620	0.001892
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	B.1.621.1	0.001012
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	N.4	0.008511
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	N.5	0.003534
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	Q.1	0.000253
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	Q.4	0.00091
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	2	2	U.2	0.017544
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	A.1	0.000282
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	A.2	0.000662
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	A.21	0.00277
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	A.23.1	0.000704
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AD.2	0.000219
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AU.3	0.00211
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.104	0.001984
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.108	0.001103
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.111	0.000183
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.120.1	0.000321
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.19	0.00114
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.23.1	0.000417
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.29.1	0.000221
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.34.1	0.00051
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.39.1	0.00004
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.4.2.1	0.000149
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.65	0.000533
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.66	0.00107
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.68	0.000274
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.7.2	0.000559
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.73	0.000665
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.75	0.000056
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.77	0.001127
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.79	0.001211
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.80	0.001129
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.87	0.000833
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.91	0.00073
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	AY.96	0.002075
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.174	0.003378
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.214	0.000055
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.25	0.000569
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.268	0.014925
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.277	0.000759
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.306	0.000438
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.307	0.002532
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.316	0.000925
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.351	0.002793
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.366	0.015873
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.374	0.002375
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.398	0.003226
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.409	0.002833
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.482	0.023256
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.516	0.066667
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.52	0.012195
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.1.524	0.020833
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.111	0.001175
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.170	0.00431
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.44	0.000519
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.45	0.000381
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.48	0.003125
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.54	0.000606
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.62	0.001192
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.7	0.000165
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.72	0.00339
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.73	0.000566
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.177.76	0.002494
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.179	0.003759
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.206	0.000816
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.237	0.004975
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.240	0.000216
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.247	0.014925
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.258.17	0.000104
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.336	0.002439
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.351.5	0.0006
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.36.10	0.004785
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.36.22	0.001208
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.36.26	0.002857
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.36.31	0.001751
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.36.36	0.000602
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.389	0.001002
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.422	0.000812
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.450	0.011364
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.456	0.003268
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.487	0.019608
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.500	0.052632
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.524	0.001406
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.533	0.009615
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.597	0.00463
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.619	0.000871
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.625	0.002353
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.636	0.006711
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	B.1.637	0.000073
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	C.18	0.002591
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	C.36	0.000911
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	N.9	0.005952
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	P.1.1	0.000318
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	P.1.9	0.004808
ORF1ab/nsp5A-B	114	V114V	gtG	gtT	1	1	P.7	0.004367

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.