CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 105 & Codon = Agc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B105R105SR3368SnonsynCgcAgc4343110367-10369

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B105R105SCgcAgc4343All0.000008
ORF1ab/nsp5A-B105R105SCgcAgc1111B.1.1.70.00001
ORF1ab/nsp5A-B105R105SCgcAgc88B.1.5250.000905
ORF1ab/nsp5A-B105R105SCgcAgc55B.10.000046
ORF1ab/nsp5A-B105R105SCgcAgc220.111111
ORF1ab/nsp5A-B105R105SCgcAgc22AY.1160.000574
ORF1ab/nsp5A-B105R105SCgcAgc22B.1.617.20.000008
ORF1ab/nsp5A-B105R105SCgcAgc11AY.210.001898
ORF1ab/nsp5A-B105R105SCgcAgc11AY.260.000028
ORF1ab/nsp5A-B105R105SCgcAgc11AY.30.00001
ORF1ab/nsp5A-B105R105SCgcAgc11AY.430.000004
ORF1ab/nsp5A-B105R105SCgcAgc11AY.450.000122
ORF1ab/nsp5A-B105R105SCgcAgc11AY.840.000437
ORF1ab/nsp5A-B105R105SCgcAgc11AY.9.20.000037
ORF1ab/nsp5A-B105R105SCgcAgc11AY.990.001049
ORF1ab/nsp5A-B105R105SCgcAgc11B.1.10.000018
ORF1ab/nsp5A-B105R105SCgcAgc11B.1.1.1010.01
ORF1ab/nsp5A-B105R105SCgcAgc11B.1.1600.000031
ORF1ab/nsp5A-B105R105SCgcAgc11B.1.2400.000216
ORF1ab/nsp5A-B105R105SCgcAgc11B.1.6360.006711