CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = Y487Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4487Y487YY3250YsyntaCtaT23112311110013-10015

Details of the mutation Y487Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4487Y487YtaCtaT23112311All0.000442
ORF1ab/nsp4487Y487YtaCtaT881881B.1.1.70.000789
ORF1ab/nsp4487Y487YtaCtaT176176AY.40.000274
ORF1ab/nsp4487Y487YtaCtaT154154B.1.6060.927711
ORF1ab/nsp4487Y487YtaCtaT110110AY.540.010488
ORF1ab/nsp4487Y487YtaCtaT7575B.1.617.20.000282
ORF1ab/nsp4487Y487YtaCtaT6262B.1.1770.000816
ORF1ab/nsp4487Y487YtaCtaT5757B.10.000522
ORF1ab/nsp4487Y487YtaCtaT5252AY.430.00023
ORF1ab/nsp4487Y487YtaCtaT4343B.1.20.000379
ORF1ab/nsp4487Y487YtaCtaT4242B.1.1.5240.875
ORF1ab/nsp4487Y487YtaCtaT3333R.10.00297
ORF1ab/nsp4487Y487YtaCtaT2929AY.50.000599
ORF1ab/nsp4487Y487YtaCtaT2929B.1.177.120.004399
ORF1ab/nsp4487Y487YtaCtaT2727B.1.6090.012943
ORF1ab/nsp4487Y487YtaCtaT2626AY.440.000158
ORF1ab/nsp4487Y487YtaCtaT2424AY.1030.000149
ORF1ab/nsp4487Y487YtaCtaT2323B.1.10.000417
ORF1ab/nsp4487Y487YtaCtaT1919AY.420.000764
ORF1ab/nsp4487Y487YtaCtaT1919B.1.3510.000565
ORF1ab/nsp4487Y487YtaCtaT1717AY.250.000102
ORF1ab/nsp4487Y487YtaCtaT1717AY.4.20.000369
ORF1ab/nsp4487Y487YtaCtaT1616AY.30.000159
ORF1ab/nsp4487Y487YtaCtaT1616P.10.000252
ORF1ab/nsp4487Y487YtaCtaT1313B.1.2430.000905
ORF1ab/nsp4487Y487YtaCtaT1111AY.1180.000689
ORF1ab/nsp4487Y487YtaCtaT1111AY.390.000272
ORF1ab/nsp4487Y487YtaCtaT1111B.1.258.170.001144
ORF1ab/nsp4487Y487YtaCtaT99AY.1190.000318
ORF1ab/nsp4487Y487YtaCtaT99AY.1200.000335
ORF1ab/nsp4487Y487YtaCtaT99AY.1210.001218
ORF1ab/nsp4487Y487YtaCtaT99B.1.1.4860.014196
ORF1ab/nsp4487Y487YtaCtaT99B.1.5260.000212
ORF1ab/nsp4487Y487YtaCtaT77AY.1020.000186
ORF1ab/nsp4487Y487YtaCtaT77AY.230.000488
ORF1ab/nsp4487Y487YtaCtaT77B.1.1.3480.005573
ORF1ab/nsp4487Y487YtaCtaT77B.1.1.5190.000278
ORF1ab/nsp4487Y487YtaCtaT77B.1.5170.002989
ORF1ab/nsp4487Y487YtaCtaT66AY.75.10.001082
ORF1ab/nsp4487Y487YtaCtaT66B.1.1600.000187
ORF1ab/nsp4487Y487YtaCtaT66B.1.177.790.014052
ORF1ab/nsp4487Y487YtaCtaT66B.1.5090.005195
ORF1ab/nsp4487Y487YtaCtaT66P.1.100.001617
ORF1ab/nsp4487Y487YtaCtaT55AY.200.000194
ORF1ab/nsp4487Y487YtaCtaT55AY.290.000079
ORF1ab/nsp4487Y487YtaCtaT55AY.470.000156
ORF1ab/nsp4487Y487YtaCtaT55B.1.1.1760.002197
ORF1ab/nsp4487Y487YtaCtaT55B.1.1.4590.076923
ORF1ab/nsp4487Y487YtaCtaT55B.1.4270.000252
ORF1ab/nsp4487Y487YtaCtaT55B.1.5960.000436
ORF1ab/nsp4487Y487YtaCtaT44AY.260.000113
ORF1ab/nsp4487Y487YtaCtaT44AY.590.002119
ORF1ab/nsp4487Y487YtaCtaT44AY.720.005442
ORF1ab/nsp4487Y487YtaCtaT44B.1.1.2140.000222
ORF1ab/nsp4487Y487YtaCtaT44B.1.160.140.008475
ORF1ab/nsp4487Y487YtaCtaT44B.1.160.290.016878
ORF1ab/nsp4487Y487YtaCtaT44B.1.4290.000094
ORF1ab/nsp4487Y487YtaCtaT44C.370.000464
ORF1ab/nsp4487Y487YtaCtaT33A.2.20.005068
ORF1ab/nsp4487Y487YtaCtaT33AY.750.000168
ORF1ab/nsp4487Y487YtaCtaT33AY.98.10.000145
ORF1ab/nsp4487Y487YtaCtaT33B.1.2210.000213
ORF1ab/nsp4487Y487YtaCtaT33B.1.2340.000396
ORF1ab/nsp4487Y487YtaCtaT33B.1.2580.0002
ORF1ab/nsp4487Y487YtaCtaT33B.1.258.220.008
ORF1ab/nsp4487Y487YtaCtaT33B.1.3110.000824
ORF1ab/nsp4487Y487YtaCtaT33B.1.621.10.001517
ORF1ab/nsp4487Y487YtaCtaT33P.20.00056
ORF1ab/nsp4487Y487YtaCtaT22AY.270.000129
ORF1ab/nsp4487Y487YtaCtaT22AY.39.10.000079
ORF1ab/nsp4487Y487YtaCtaT22AY.4.50.000215
ORF1ab/nsp4487Y487YtaCtaT22AY.450.000243
ORF1ab/nsp4487Y487YtaCtaT22AY.46.60.000144
ORF1ab/nsp4487Y487YtaCtaT22AY.5.40.000553
ORF1ab/nsp4487Y487YtaCtaT22AY.530.000575
ORF1ab/nsp4487Y487YtaCtaT22AY.740.000231
ORF1ab/nsp4487Y487YtaCtaT22AY.99.20.000184
ORF1ab/nsp4487Y487YtaCtaT22B.1.1.2360.013793
ORF1ab/nsp4487Y487YtaCtaT22B.1.1.2410.004141
ORF1ab/nsp4487Y487YtaCtaT22B.1.1.2940.002532
ORF1ab/nsp4487Y487YtaCtaT22B.1.1.3170.000823
ORF1ab/nsp4487Y487YtaCtaT22B.1.1.3700.025316
ORF1ab/nsp4487Y487YtaCtaT22B.1.2930.025
ORF1ab/nsp4487Y487YtaCtaT22B.1.3610.002577
ORF1ab/nsp4487Y487YtaCtaT22B.1.3690.00057
ORF1ab/nsp4487Y487YtaCtaT22B.1.3970.009709
ORF1ab/nsp4487Y487YtaCtaT22C.320.046512
ORF1ab/nsp4487Y487YtaCtaT11A0.000387
ORF1ab/nsp4487Y487YtaCtaT11AY.10.000396
ORF1ab/nsp4487Y487YtaCtaT11AY.1000.000046
ORF1ab/nsp4487Y487YtaCtaT11AY.1070.000466
ORF1ab/nsp4487Y487YtaCtaT11AY.1110.000183
ORF1ab/nsp4487Y487YtaCtaT11AY.1130.000142
ORF1ab/nsp4487Y487YtaCtaT11AY.1170.000085
ORF1ab/nsp4487Y487YtaCtaT11AY.130.000161
ORF1ab/nsp4487Y487YtaCtaT11AY.140.000088
ORF1ab/nsp4487Y487YtaCtaT11AY.160.00038
ORF1ab/nsp4487Y487YtaCtaT11AY.16.10.00047
ORF1ab/nsp4487Y487YtaCtaT11AY.23.10.000417
ORF1ab/nsp4487Y487YtaCtaT11AY.240.000431
ORF1ab/nsp4487Y487YtaCtaT11AY.3.10.000085
ORF1ab/nsp4487Y487YtaCtaT11AY.360.000148
ORF1ab/nsp4487Y487YtaCtaT11AY.460.000104
ORF1ab/nsp4487Y487YtaCtaT11AY.46.20.000635
ORF1ab/nsp4487Y487YtaCtaT11AY.46.50.000198
ORF1ab/nsp4487Y487YtaCtaT11AY.5.30.000337
ORF1ab/nsp4487Y487YtaCtaT11AY.60.000041
ORF1ab/nsp4487Y487YtaCtaT11AY.610.000105
ORF1ab/nsp4487Y487YtaCtaT11AY.650.000533
ORF1ab/nsp4487Y487YtaCtaT11AY.770.001127
ORF1ab/nsp4487Y487YtaCtaT11AY.90.000068
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.10.000327
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.2070.001182
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.2100.005714
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.280.000311
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.2910.000742
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.3510.002793
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.3540.004386
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.4160.000905
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.460.004367
ORF1ab/nsp4487Y487YtaCtaT11B.1.1.5280.004808
ORF1ab/nsp4487Y487YtaCtaT11B.1.1390.000733
ORF1ab/nsp4487Y487YtaCtaT11B.1.1570.002985
ORF1ab/nsp4487Y487YtaCtaT11B.1.177.190.001431
ORF1ab/nsp4487Y487YtaCtaT11B.1.177.230.003236
ORF1ab/nsp4487Y487YtaCtaT11B.1.177.40.000211
ORF1ab/nsp4487Y487YtaCtaT11B.1.177.440.000519
ORF1ab/nsp4487Y487YtaCtaT11B.1.177.70.000165
ORF1ab/nsp4487Y487YtaCtaT11B.1.177.730.000566
ORF1ab/nsp4487Y487YtaCtaT11B.1.221.20.004016
ORF1ab/nsp4487Y487YtaCtaT11B.1.2390.001221
ORF1ab/nsp4487Y487YtaCtaT11B.1.2410.000812
ORF1ab/nsp4487Y487YtaCtaT11B.1.2800.007143
ORF1ab/nsp4487Y487YtaCtaT11B.1.3130.006579
ORF1ab/nsp4487Y487YtaCtaT11B.1.351.20.000303
ORF1ab/nsp4487Y487YtaCtaT11B.1.36.10.00114
ORF1ab/nsp4487Y487YtaCtaT11B.1.36.290.000517
ORF1ab/nsp4487Y487YtaCtaT11B.1.36.360.000602
ORF1ab/nsp4487Y487YtaCtaT11B.1.4040.001302
ORF1ab/nsp4487Y487YtaCtaT11B.1.4220.000812
ORF1ab/nsp4487Y487YtaCtaT11B.1.438.10.000107
ORF1ab/nsp4487Y487YtaCtaT11B.1.438.40.021277
ORF1ab/nsp4487Y487YtaCtaT11B.1.466.20.000391
ORF1ab/nsp4487Y487YtaCtaT11B.1.5200.021739
ORF1ab/nsp4487Y487YtaCtaT11B.1.5250.000113
ORF1ab/nsp4487Y487YtaCtaT11B.1.5650.00081
ORF1ab/nsp4487Y487YtaCtaT11B.1.5740.002151
ORF1ab/nsp4487Y487YtaCtaT11B.1.5760.000907
ORF1ab/nsp4487Y487YtaCtaT11B.1.5800.004065
ORF1ab/nsp4487Y487YtaCtaT11B.1.5820.000491
ORF1ab/nsp4487Y487YtaCtaT11B.1.617.10.000129
ORF1ab/nsp4487Y487YtaCtaT11B.1.6210.000089
ORF1ab/nsp4487Y487YtaCtaT11B.1.6300.005236
ORF1ab/nsp4487Y487YtaCtaT11B.1.90.006173
ORF1ab/nsp4487Y487YtaCtaT11P.1.10.000318
ORF1ab/nsp4487Y487YtaCtaT11P.1.120.000484
ORF1ab/nsp4487Y487YtaCtaT11P.1.140.000048
ORF1ab/nsp4487Y487YtaCtaT11P.1.170.000162
ORF1ab/nsp4487Y487YtaCtaT11P.30.001595
ORF1ab/nsp4487Y487YtaCtaT11P.70.004367