CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = Y46del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp446Y46delY2809deldelTAC---868618690-8692

Details of the mutation Y46del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp446Y46delTAC---8686All0.000016
ORF1ab/nsp446Y46delTAC---3333B.1.1.70.00003
ORF1ab/nsp446Y46delTAC---77B.10.000064
ORF1ab/nsp446Y46delTAC---66AY.430.000027
ORF1ab/nsp446Y46delTAC---44AY.40.000006
ORF1ab/nsp446Y46delTAC---44B.1.1770.000053
ORF1ab/nsp446Y46delTAC---220.111111
ORF1ab/nsp446Y46delTAC---22B.1.10.000036
ORF1ab/nsp446Y46delTAC---22B.1.1.3150.016949
ORF1ab/nsp446Y46delTAC---22B.1.20.000018
ORF1ab/nsp446Y46delTAC---22B.1.6210.000177
ORF1ab/nsp446Y46delTAC---11AY.330.000067
ORF1ab/nsp446Y46delTAC---11AY.34.10.00051
ORF1ab/nsp446Y46delTAC---11AY.4.50.000107
ORF1ab/nsp446Y46delTAC---11AY.420.00004
ORF1ab/nsp446Y46delTAC---11AY.46.20.000635
ORF1ab/nsp446Y46delTAC---11AY.590.00053
ORF1ab/nsp446Y46delTAC---11AY.600.000938
ORF1ab/nsp446Y46delTAC---11B.1.1.3060.000438
ORF1ab/nsp446Y46delTAC---11B.1.1.4090.002833
ORF1ab/nsp446Y46delTAC---11B.1.1.5190.00004
ORF1ab/nsp446Y46delTAC---11B.1.1.700.000341
ORF1ab/nsp446Y46delTAC---11B.1.1400.018868
ORF1ab/nsp446Y46delTAC---11B.1.177.570.000281
ORF1ab/nsp446Y46delTAC---11B.1.177.620.001192
ORF1ab/nsp446Y46delTAC---11B.1.177.70.000165
ORF1ab/nsp446Y46delTAC---11B.1.177.830.001481
ORF1ab/nsp446Y46delTAC---11B.1.221.10.002907
ORF1ab/nsp446Y46delTAC---11B.1.360.000146
ORF1ab/nsp446Y46delTAC---11B.1.5960.000087
ORF1ab/nsp446Y46delTAC---11B.1.617.10.000129
ORF1ab/nsp446Y46delTAC---11B.1.617.20.000004
ORF1ab/nsp446Y46delTAC---11P.10.000016