CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = Y348del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4348Y348delY3111deldelTAC---16116119596-9598

Details of the mutation Y348del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4348Y348delTAC---161161All0.000031
ORF1ab/nsp4348Y348delTAC---8686B.1.1.70.000077
ORF1ab/nsp4348Y348delTAC---1717B.1.1770.000224
ORF1ab/nsp4348Y348delTAC---1010AY.40.000016
ORF1ab/nsp4348Y348delTAC---77AY.4.50.000752
ORF1ab/nsp4348Y348delTAC---55AY.430.000022
ORF1ab/nsp4348Y348delTAC---33B.1.177.40.000633
ORF1ab/nsp4348Y348delTAC---33B.1.617.20.000011
ORF1ab/nsp4348Y348delTAC---22B.1.177.170.001642
ORF1ab/nsp4348Y348delTAC---22B.1.177.870.001456
ORF1ab/nsp4348Y348delTAC---22B.1.20.000018
ORF1ab/nsp4348Y348delTAC---11AD.20.000219
ORF1ab/nsp4348Y348delTAC---11AY.1110.000183
ORF1ab/nsp4348Y348delTAC---11AY.190.00114
ORF1ab/nsp4348Y348delTAC---11AY.440.000006
ORF1ab/nsp4348Y348delTAC---11AY.46.20.000635
ORF1ab/nsp4348Y348delTAC---11AY.60.000041
ORF1ab/nsp4348Y348delTAC---11AY.600.000938
ORF1ab/nsp4348Y348delTAC---11AY.680.000274
ORF1ab/nsp4348Y348delTAC---11AY.90.000068
ORF1ab/nsp4348Y348delTAC---11AY.99.10.001553
ORF1ab/nsp4348Y348delTAC---11B.1.1.1390.022727
ORF1ab/nsp4348Y348delTAC---11B.1.1.3120.001912
ORF1ab/nsp4348Y348delTAC---11B.1.1.510.001718
ORF1ab/nsp4348Y348delTAC---11B.1.1.700.000341
ORF1ab/nsp4348Y348delTAC---11B.1.177.160.000664
ORF1ab/nsp4348Y348delTAC---11B.1.177.180.00116
ORF1ab/nsp4348Y348delTAC---11B.1.177.190.001431
ORF1ab/nsp4348Y348delTAC---11B.1.177.560.000668
ORF1ab/nsp4348Y348delTAC---11B.1.177.690.001484
ORF1ab/nsp4348Y348delTAC---11B.1.177.760.002494
ORF1ab/nsp4348Y348delTAC---11B.150.017544
ORF1ab/nsp4348Y348delTAC---11C.170.055556
ORF1ab/nsp4348Y348delTAC---11C.350.000774
ORF1ab/nsp4348Y348delTAC---11Q.10.000126