CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = Y142Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4142Y142YY2905YsyntaCtaT2317231718978-8980

Details of the mutation Y142Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4142Y142YtaCtaT23172317All0.000443
ORF1ab/nsp4142Y142YtaCtaT330330B.1.1.70.000295
ORF1ab/nsp4142Y142YtaCtaT306306P.60.962264
ORF1ab/nsp4142Y142YtaCtaT258258AY.90.01744
ORF1ab/nsp4142Y142YtaCtaT166166B.1.617.20.000625
ORF1ab/nsp4142Y142YtaCtaT144144AY.230.010044
ORF1ab/nsp4142Y142YtaCtaT104104AY.1020.002757
ORF1ab/nsp4142Y142YtaCtaT8383AY.40.000129
ORF1ab/nsp4142Y142YtaCtaT7676AY.440.000463
ORF1ab/nsp4142Y142YtaCtaT6161B.1.20.000537
ORF1ab/nsp4142Y142YtaCtaT5252B.1.4090.040625
ORF1ab/nsp4142Y142YtaCtaT4242AY.1030.000261
ORF1ab/nsp4142Y142YtaCtaT3939AY.250.000235
ORF1ab/nsp4142Y142YtaCtaT3232B.1.177.210.002447
ORF1ab/nsp4142Y142YtaCtaT3232B.1.2210.002273
ORF1ab/nsp4142Y142YtaCtaT3131P.10.000488
ORF1ab/nsp4142Y142YtaCtaT3030AY.430.000133
ORF1ab/nsp4142Y142YtaCtaT2424A.20.015884
ORF1ab/nsp4142Y142YtaCtaT2424AY.500.019185
ORF1ab/nsp4142Y142YtaCtaT2323AY.980.001817
ORF1ab/nsp4142Y142YtaCtaT2323P.20.004293
ORF1ab/nsp4142Y142YtaCtaT2121B.1.3690.00599
ORF1ab/nsp4142Y142YtaCtaT2020AY.30.000199
ORF1ab/nsp4142Y142YtaCtaT2020B.10.000183
ORF1ab/nsp4142Y142YtaCtaT1919AY.290.0003
ORF1ab/nsp4142Y142YtaCtaT1919AY.9.20.000698
ORF1ab/nsp4142Y142YtaCtaT1919B.1.258.170.001975
ORF1ab/nsp4142Y142YtaCtaT1717AY.390.00042
ORF1ab/nsp4142Y142YtaCtaT1414B.1.2390.017094
ORF1ab/nsp4142Y142YtaCtaT1212B.1.1770.000158
ORF1ab/nsp4142Y142YtaCtaT1111B.1.1.5190.000437
ORF1ab/nsp4142Y142YtaCtaT1010AY.50.000206
ORF1ab/nsp4142Y142YtaCtaT99B.1.5260.000212
ORF1ab/nsp4142Y142YtaCtaT88B.1.2580.000532
ORF1ab/nsp4142Y142YtaCtaT88B.1.3510.000238
ORF1ab/nsp4142Y142YtaCtaT88B.1.4270.000404
ORF1ab/nsp4142Y142YtaCtaT77AY.1200.00026
ORF1ab/nsp4142Y142YtaCtaT77Q.30.001015
ORF1ab/nsp4142Y142YtaCtaT66AY.460.000624
ORF1ab/nsp4142Y142YtaCtaT66B.1.10.000109
ORF1ab/nsp4142Y142YtaCtaT66B.1.6210.000531
ORF1ab/nsp4142Y142YtaCtaT55AY.46.20.003177
ORF1ab/nsp4142Y142YtaCtaT55B0.000639
ORF1ab/nsp4142Y142YtaCtaT55B.1.5820.002453
ORF1ab/nsp4142Y142YtaCtaT55C.370.00058
ORF1ab/nsp4142Y142YtaCtaT44AY.130.000644
ORF1ab/nsp4142Y142YtaCtaT44AY.260.000113
ORF1ab/nsp4142Y142YtaCtaT44AY.300.001583
ORF1ab/nsp4142Y142YtaCtaT44AY.60.000165
ORF1ab/nsp4142Y142YtaCtaT44AY.610.000419
ORF1ab/nsp4142Y142YtaCtaT44B.1.1.1760.001757
ORF1ab/nsp4142Y142YtaCtaT44B.1.177.810.000757
ORF1ab/nsp4142Y142YtaCtaT44P.1.170.000647
ORF1ab/nsp4142Y142YtaCtaT33A.270.004967
ORF1ab/nsp4142Y142YtaCtaT33AY.1160.00086
ORF1ab/nsp4142Y142YtaCtaT33AY.1180.000188
ORF1ab/nsp4142Y142YtaCtaT33AY.200.000117
ORF1ab/nsp4142Y142YtaCtaT33AY.29.10.000662
ORF1ab/nsp4142Y142YtaCtaT33AY.4.10.002212
ORF1ab/nsp4142Y142YtaCtaT33AY.450.000365
ORF1ab/nsp4142Y142YtaCtaT33AY.470.000093
ORF1ab/nsp4142Y142YtaCtaT33AY.5.30.001012
ORF1ab/nsp4142Y142YtaCtaT33AY.750.000168
ORF1ab/nsp4142Y142YtaCtaT33B.1.1.280.000934
ORF1ab/nsp4142Y142YtaCtaT33B.1.1600.000094
ORF1ab/nsp4142Y142YtaCtaT33B.1.177.860.00055
ORF1ab/nsp4142Y142YtaCtaT33B.1.2340.000396
ORF1ab/nsp4142Y142YtaCtaT33B.1.2400.000647
ORF1ab/nsp4142Y142YtaCtaT33B.1.2430.000209
ORF1ab/nsp4142Y142YtaCtaT33B.1.4990.003151
ORF1ab/nsp4142Y142YtaCtaT33P.1.120.001452
ORF1ab/nsp4142Y142YtaCtaT22A.23.10.001408
ORF1ab/nsp4142Y142YtaCtaT22AY.330.000134
ORF1ab/nsp4142Y142YtaCtaT22AY.690.000373
ORF1ab/nsp4142Y142YtaCtaT22AY.940.000885
ORF1ab/nsp4142Y142YtaCtaT22B.1.1.2140.000111
ORF1ab/nsp4142Y142YtaCtaT22B.1.1.3180.000604
ORF1ab/nsp4142Y142YtaCtaT22B.1.177.150.001262
ORF1ab/nsp4142Y142YtaCtaT22B.1.36.290.001035
ORF1ab/nsp4142Y142YtaCtaT22B.1.4970.00063
ORF1ab/nsp4142Y142YtaCtaT22B.1.6370.000146
ORF1ab/nsp4142Y142YtaCtaT22D.20.00015
ORF1ab/nsp4142Y142YtaCtaT22P.1.140.000096
ORF1ab/nsp4142Y142YtaCtaT11A0.000387
ORF1ab/nsp4142Y142YtaCtaT11A.50.001923
ORF1ab/nsp4142Y142YtaCtaT11AE.80.000489
ORF1ab/nsp4142Y142YtaCtaT11AY.100.00053
ORF1ab/nsp4142Y142YtaCtaT11AY.1170.000085
ORF1ab/nsp4142Y142YtaCtaT11AY.1190.000035
ORF1ab/nsp4142Y142YtaCtaT11AY.120.10.000321
ORF1ab/nsp4142Y142YtaCtaT11AY.16.10.00047
ORF1ab/nsp4142Y142YtaCtaT11AY.210.001898
ORF1ab/nsp4142Y142YtaCtaT11AY.3.10.000085
ORF1ab/nsp4142Y142YtaCtaT11AY.320.000532
ORF1ab/nsp4142Y142YtaCtaT11AY.340.000097
ORF1ab/nsp4142Y142YtaCtaT11AY.4.20.000022
ORF1ab/nsp4142Y142YtaCtaT11AY.4.2.10.000149
ORF1ab/nsp4142Y142YtaCtaT11AY.420.00004
ORF1ab/nsp4142Y142YtaCtaT11AY.46.40.000165
ORF1ab/nsp4142Y142YtaCtaT11AY.46.60.000072
ORF1ab/nsp4142Y142YtaCtaT11AY.480.000465
ORF1ab/nsp4142Y142YtaCtaT11AY.490.003195
ORF1ab/nsp4142Y142YtaCtaT11AY.5.40.000277
ORF1ab/nsp4142Y142YtaCtaT11AY.7.10.000113
ORF1ab/nsp4142Y142YtaCtaT11AY.740.000116
ORF1ab/nsp4142Y142YtaCtaT11AY.75.10.00018
ORF1ab/nsp4142Y142YtaCtaT11AY.840.000437
ORF1ab/nsp4142Y142YtaCtaT11AY.9.10.000084
ORF1ab/nsp4142Y142YtaCtaT11AY.99.20.000092
ORF1ab/nsp4142Y142YtaCtaT11AZ.10.000867
ORF1ab/nsp4142Y142YtaCtaT11B.1.1.10.000327
ORF1ab/nsp4142Y142YtaCtaT11B.1.1.120.007463
ORF1ab/nsp4142Y142YtaCtaT11B.1.1.2240.014286
ORF1ab/nsp4142Y142YtaCtaT11B.1.1.3500.04
ORF1ab/nsp4142Y142YtaCtaT11B.1.1.390.00051
ORF1ab/nsp4142Y142YtaCtaT11B.1.1.630.000386
ORF1ab/nsp4142Y142YtaCtaT11B.1.177.100.000878
ORF1ab/nsp4142Y142YtaCtaT11B.1.177.120.000152
ORF1ab/nsp4142Y142YtaCtaT11B.1.177.560.000668
ORF1ab/nsp4142Y142YtaCtaT11B.1.177.600.000218
ORF1ab/nsp4142Y142YtaCtaT11B.1.177.70.000165
ORF1ab/nsp4142Y142YtaCtaT11B.1.2930.0125
ORF1ab/nsp4142Y142YtaCtaT11B.1.3110.000275
ORF1ab/nsp4142Y142YtaCtaT11B.1.3400.004292
ORF1ab/nsp4142Y142YtaCtaT11B.1.3460.001311
ORF1ab/nsp4142Y142YtaCtaT11B.1.360.000146
ORF1ab/nsp4142Y142YtaCtaT11B.1.36.100.004785
ORF1ab/nsp4142Y142YtaCtaT11B.1.3670.000792
ORF1ab/nsp4142Y142YtaCtaT11B.1.3970.004854
ORF1ab/nsp4142Y142YtaCtaT11B.1.4220.000812
ORF1ab/nsp4142Y142YtaCtaT11B.1.438.10.000107
ORF1ab/nsp4142Y142YtaCtaT11B.1.4620.007246
ORF1ab/nsp4142Y142YtaCtaT11B.1.4710.002732
ORF1ab/nsp4142Y142YtaCtaT11B.1.4800.002488
ORF1ab/nsp4142Y142YtaCtaT11B.1.5010.007353
ORF1ab/nsp4142Y142YtaCtaT11B.1.5610.000397
ORF1ab/nsp4142Y142YtaCtaT11B.1.5880.00091
ORF1ab/nsp4142Y142YtaCtaT11B.1.5960.000087
ORF1ab/nsp4142Y142YtaCtaT11B.1.6090.000479
ORF1ab/nsp4142Y142YtaCtaT11B.1.617.10.000129
ORF1ab/nsp4142Y142YtaCtaT11B.1.6280.000352
ORF1ab/nsp4142Y142YtaCtaT11B.1.6300.005236
ORF1ab/nsp4142Y142YtaCtaT11B.1.930.000934