CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = V94del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp494V94del1V2857del1delgtCgt-620.3333338834-8836
ORF1ab/nsp494V94del1V2857del1delGTc-Nc620.3333338834-8836
ORF1ab/nsp494V94del1V2857del1delGtc-tc610.1666678834-8836
ORF1ab/nsp494V94del1V2857del1delgTcg-c610.1666678834-8836

Details of the mutation V94del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp494V94del1gtCgt-26All0
ORF1ab/nsp494V94del1GTc-Nc26All0
ORF1ab/nsp494V94del1Gtc-tc16All0
ORF1ab/nsp494V94del1gTcg-c16All0
ORF1ab/nsp494V94del1GTc-Nc220.111111
ORF1ab/nsp494V94del1gtCgt-11AY.430.000004
ORF1ab/nsp494V94del1gTcg-c11B.10.000009
ORF1ab/nsp494V94del1gtCgt-11B.1.20.000009
ORF1ab/nsp494V94del1Gtc-tc11P.1.170.000162