CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = V94V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp494V94VV2857VsyngtCgtT192318770.9760798834-8836
ORF1ab/nsp494V94VV2857VsyngtCgtA1923290.01508068834-8836
ORF1ab/nsp494V94VV2857VsyngtCgtG1923170.008840358834-8836

Details of the mutation V94V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp494V94VgtCgtT18771923All0.000359
ORF1ab/nsp494V94VgtCgtA291923All0.000006
ORF1ab/nsp494V94VgtCgtG171923All0.000003
ORF1ab/nsp494V94VgtCgtT410410B.1.1.3740.973872
ORF1ab/nsp494V94VgtCgtT305305B.1.5510.393548
ORF1ab/nsp494V94VgtCgtT226233B.1.1.70.000202
ORF1ab/nsp494V94VgtCgtA5233B.1.1.70.000004
ORF1ab/nsp494V94VgtCgtG2233B.1.1.70.000002
ORF1ab/nsp494V94VgtCgtT147147AY.330.009816
ORF1ab/nsp494V94VgtCgtT113114AY.40.000176
ORF1ab/nsp494V94VgtCgtA1114AY.40.000002
ORF1ab/nsp494V94VgtCgtT8787B.1.20.000766
ORF1ab/nsp494V94VgtCgtT5757B.1.617.20.000215
ORF1ab/nsp494V94VgtCgtT5555B.1.36.80.055
ORF1ab/nsp494V94VgtCgtT3838P.1.10.012071
ORF1ab/nsp494V94VgtCgtT3336B.10.000302
ORF1ab/nsp494V94VgtCgtA336B.10.000027
ORF1ab/nsp494V94VgtCgtT2335P.10.000362
ORF1ab/nsp494V94VgtCgtG1235P.10.000189
ORF1ab/nsp494V94VgtCgtT2023AY.430.000089
ORF1ab/nsp494V94VgtCgtA323AY.430.000013
ORF1ab/nsp494V94VgtCgtT2222AY.440.000134
ORF1ab/nsp494V94VgtCgtT1919B.1.10.000345
ORF1ab/nsp494V94VgtCgtT1818B.1.4290.000424
ORF1ab/nsp494V94VgtCgtT1616AY.140.001408
ORF1ab/nsp494V94VgtCgtT1515B.1.1770.000198
ORF1ab/nsp494V94VgtCgtT1515B.1.360.002189
ORF1ab/nsp494V94VgtCgtT1111B.1.3510.000327
ORF1ab/nsp494V94VgtCgtT1010AY.50.000206
ORF1ab/nsp494V94VgtCgtT910B.1.1.120.067164
ORF1ab/nsp494V94VgtCgtG110B.1.1.120.007463
ORF1ab/nsp494V94VgtCgtT99B.1.1.5260.031915
ORF1ab/nsp494V94VgtCgtT99B.1.5260.000212
ORF1ab/nsp494V94VgtCgtT88B.1.1.50.066667
ORF1ab/nsp494V94VgtCgtT77AY.250.000042
ORF1ab/nsp494V94VgtCgtT67B.1.1.5190.000238
ORF1ab/nsp494V94VgtCgtA17B.1.1.5190.00004
ORF1ab/nsp494V94VgtCgtT77B.1.2580.000466
ORF1ab/nsp494V94VgtCgtT77C.370.000812
ORF1ab/nsp494V94VgtCgtT66AY.1180.000376
ORF1ab/nsp494V94VgtCgtT66B.1.1600.000187
ORF1ab/nsp494V94VgtCgtT66B.1.6210.000531
ORF1ab/nsp494V94VgtCgtT45AY.1030.000025
ORF1ab/nsp494V94VgtCgtG15AY.1030.000006
ORF1ab/nsp494V94VgtCgtT55AY.350.001165
ORF1ab/nsp494V94VgtCgtT55AY.390.000124
ORF1ab/nsp494V94VgtCgtT55AY.39.10.000198
ORF1ab/nsp494V94VgtCgtT55B.1.1.1920.011547
ORF1ab/nsp494V94VgtCgtT55B.1.177.570.001405
ORF1ab/nsp494V94VgtCgtT34AY.230.000209
ORF1ab/nsp494V94VgtCgtA14AY.230.00007
ORF1ab/nsp494V94VgtCgtT44AY.30.00004
ORF1ab/nsp494V94VgtCgtT44AY.610.000419
ORF1ab/nsp494V94VgtCgtT44B.1.1.4620.034483
ORF1ab/nsp494V94VgtCgtT33AY.260.000085
ORF1ab/nsp494V94VgtCgtT33AY.4.20.000065
ORF1ab/nsp494V94VgtCgtA33AY.4.50.000322
ORF1ab/nsp494V94VgtCgtT33AY.470.000093
ORF1ab/nsp494V94VgtCgtT33B.1.1.390.001529
ORF1ab/nsp494V94VgtCgtT33B.1.1.3980.009677
ORF1ab/nsp494V94VgtCgtT33B.1.1.500.002037
ORF1ab/nsp494V94VgtCgtT33B.1.177.200.004552
ORF1ab/nsp494V94VgtCgtT33B.1.36.310.005254
ORF1ab/nsp494V94VgtCgtT33B.1.416.10.004687
ORF1ab/nsp494V94VgtCgtT33B.1.617.10.000387
ORF1ab/nsp494V94VgtCgtT33B.390.006993
ORF1ab/nsp494V94VgtCgtT33P.1.170.000485
ORF1ab/nsp494V94VgtCgtA33P.20.00056
ORF1ab/nsp494V94VgtCgtT220.111111
ORF1ab/nsp494V94VgtCgtT22AY.1190.000071
ORF1ab/nsp494V94VgtCgtT22AY.270.000129
ORF1ab/nsp494V94VgtCgtT22AY.60.000082
ORF1ab/nsp494V94VgtCgtT22AY.9.20.000073
ORF1ab/nsp494V94VgtCgtT12B0.000128
ORF1ab/nsp494V94VgtCgtA12B0.000128
ORF1ab/nsp494V94VgtCgtT22B.1.1.10.000653
ORF1ab/nsp494V94VgtCgtT22B.1.1.1340.022727
ORF1ab/nsp494V94VgtCgtT22B.1.1.2220.000408
ORF1ab/nsp494V94VgtCgtT22B.1.1.330.000842
ORF1ab/nsp494V94VgtCgtT22B.1.2650.002541
ORF1ab/nsp494V94VgtCgtA12B.1.3010.005917
ORF1ab/nsp494V94VgtCgtT12B.1.3010.005917
ORF1ab/nsp494V94VgtCgtT22B.1.3230.041667
ORF1ab/nsp494V94VgtCgtT22B.1.4700.002809
ORF1ab/nsp494V94VgtCgtT12P.1.120.000484
ORF1ab/nsp494V94VgtCgtG12P.1.120.000484
ORF1ab/nsp494V94VgtCgtT22Q.30.00029
ORF1ab/nsp494V94VgtCgtA11A0.000387
ORF1ab/nsp494V94VgtCgtT11A.2.20.001689
ORF1ab/nsp494V94VgtCgtT11AY.1020.000027
ORF1ab/nsp494V94VgtCgtT11AY.1160.000287
ORF1ab/nsp494V94VgtCgtT11AY.116.10.000311
ORF1ab/nsp494V94VgtCgtT11AY.120.000316
ORF1ab/nsp494V94VgtCgtT11AY.1200.000037
ORF1ab/nsp494V94VgtCgtA11AY.130.000161
ORF1ab/nsp494V94VgtCgtT11AY.20.000356
ORF1ab/nsp494V94VgtCgtT11AY.290.000016
ORF1ab/nsp494V94VgtCgtT11AY.320.000532
ORF1ab/nsp494V94VgtCgtT11AY.34.10.00051
ORF1ab/nsp494V94VgtCgtT11AY.380.000499
ORF1ab/nsp494V94VgtCgtA11AY.420.00004
ORF1ab/nsp494V94VgtCgtT11AY.460.000104
ORF1ab/nsp494V94VgtCgtT11AY.46.30.000934
ORF1ab/nsp494V94VgtCgtT11AY.5.40.000277
ORF1ab/nsp494V94VgtCgtT11AY.540.000095
ORF1ab/nsp494V94VgtCgtT11AY.690.000187
ORF1ab/nsp494V94VgtCgtT11AY.750.000056
ORF1ab/nsp494V94VgtCgtT11AY.75.10.00018
ORF1ab/nsp494V94VgtCgtT11AY.960.002075
ORF1ab/nsp494V94VgtCgtT11AY.980.000079
ORF1ab/nsp494V94VgtCgtT11AY.98.10.000048
ORF1ab/nsp494V94VgtCgtT11B.1.1.1610.003534
ORF1ab/nsp494V94VgtCgtA11B.1.1.1890.001513
ORF1ab/nsp494V94VgtCgtT11B.1.1.2000.007463
ORF1ab/nsp494V94VgtCgtT11B.1.1.3340.016393
ORF1ab/nsp494V94VgtCgtT11B.1.1.3540.004386
ORF1ab/nsp494V94VgtCgtT11B.1.1.3630.005988
ORF1ab/nsp494V94VgtCgtT11B.1.1.370.000193
ORF1ab/nsp494V94VgtCgtT11B.1.1.4370.010417
ORF1ab/nsp494V94VgtCgtT11B.1.1.4640.001473
ORF1ab/nsp494V94VgtCgtT11B.1.1.560.017857
ORF1ab/nsp494V94VgtCgtT11B.1.1.630.000386
ORF1ab/nsp494V94VgtCgtT11B.1.140.017544
ORF1ab/nsp494V94VgtCgtT11B.1.1570.002985
ORF1ab/nsp494V94VgtCgtT11B.1.177.400.005155
ORF1ab/nsp494V94VgtCgtT11B.1.177.440.000519
ORF1ab/nsp494V94VgtCgtT11B.1.177.730.000566
ORF1ab/nsp494V94VgtCgtT11B.1.2400.000216
ORF1ab/nsp494V94VgtCgtT11B.1.2410.000812
ORF1ab/nsp494V94VgtCgtT11B.1.2430.00007
ORF1ab/nsp494V94VgtCgtT11B.1.3110.000275
ORF1ab/nsp494V94VgtCgtT11B.1.3960.000706
ORF1ab/nsp494V94VgtCgtA11B.1.466.20.000391
ORF1ab/nsp494V94VgtCgtT11B.1.5690.014493
ORF1ab/nsp494V94VgtCgtA11B.1.5880.00091
ORF1ab/nsp494V94VgtCgtT11B.1.621.10.000506
ORF1ab/nsp494V94VgtCgtT11B.1.6270.00202
ORF1ab/nsp494V94VgtCgtT11B.4.70.010101
ORF1ab/nsp494V94VgtCgtT11C.36.30.000567
ORF1ab/nsp494V94VgtCgtA11D.20.000075
ORF1ab/nsp494V94VgtCgtT11P.1.150.000232
ORF1ab/nsp494V94VgtCgtT11Q.10.000126