CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = V498V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4498V498VV3261VsyngtTgtC8577950.92765510046-10048
ORF1ab/nsp4498V498VV3261VsyngtTgtG857530.061843610046-10048
ORF1ab/nsp4498V498VV3261VsyngtTgtA85790.010501810046-10048

Details of the mutation V498V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4498V498VgtTgtC795857All0.000152
ORF1ab/nsp4498V498VgtTgtG53857All0.00001
ORF1ab/nsp4498V498VgtTgtA9857All0.000002
ORF1ab/nsp4498V498VgtTgtC261261B.1.1.5190.010365
ORF1ab/nsp4498V498VgtTgtC127127B.1.5770.087285
ORF1ab/nsp4498V498VgtTgtC81103B.1.1.70.000073
ORF1ab/nsp4498V498VgtTgtG19103B.1.1.70.000017
ORF1ab/nsp4498V498VgtTgtA3103B.1.1.70.000003
ORF1ab/nsp4498V498VgtTgtC8383Q.60.549669
ORF1ab/nsp4498V498VgtTgtC5050AY.60.002056
ORF1ab/nsp4498V498VgtTgtC3842AY.40.000059
ORF1ab/nsp4498V498VgtTgtG442AY.40.000006
ORF1ab/nsp4498V498VgtTgtC2425B.1.20.000211
ORF1ab/nsp4498V498VgtTgtG125B.1.20.000009
ORF1ab/nsp4498V498VgtTgtC1616B.1.1770.000211
ORF1ab/nsp4498V498VgtTgtG1313AY.1200.000483
ORF1ab/nsp4498V498VgtTgtC1313B.1.2430.000905
ORF1ab/nsp4498V498VgtTgtC79B.10.000064
ORF1ab/nsp4498V498VgtTgtA19B.10.000009
ORF1ab/nsp4498V498VgtTgtG19B.10.000009
ORF1ab/nsp4498V498VgtTgtC78AY.430.000031
ORF1ab/nsp4498V498VgtTgtG18AY.430.000004
ORF1ab/nsp4498V498VgtTgtC68B.1.10.000109
ORF1ab/nsp4498V498VgtTgtG28B.1.10.000036
ORF1ab/nsp4498V498VgtTgtC88B.1.1.3170.003294
ORF1ab/nsp4498V498VgtTgtC66AY.30.00006
ORF1ab/nsp4498V498VgtTgtG36B.1.4290.000071
ORF1ab/nsp4498V498VgtTgtC36B.1.4290.000071
ORF1ab/nsp4498V498VgtTgtC45B.1.1600.000125
ORF1ab/nsp4498V498VgtTgtG15B.1.1600.000031
ORF1ab/nsp4498V498VgtTgtC55B.1.5950.001305
ORF1ab/nsp4498V498VgtTgtC55B.1.617.20.000019
ORF1ab/nsp4498V498VgtTgtC34P.10.000047
ORF1ab/nsp4498V498VgtTgtG14P.10.000016
ORF1ab/nsp4498V498VgtTgtC23AY.330.000134
ORF1ab/nsp4498V498VgtTgtG13AY.330.000067
ORF1ab/nsp4498V498VgtTgtC23B.1.4270.000101
ORF1ab/nsp4498V498VgtTgtA13B.1.4270.00005
ORF1ab/nsp4498V498VgtTgtC33B.1.5260.000071
ORF1ab/nsp4498V498VgtTgtC33B.1.6370.000219
ORF1ab/nsp4498V498VgtTgtC22AY.1020.000053
ORF1ab/nsp4498V498VgtTgtC22AY.1030.000012
ORF1ab/nsp4498V498VgtTgtG12AY.250.000006
ORF1ab/nsp4498V498VgtTgtC12AY.250.000006
ORF1ab/nsp4498V498VgtTgtG22AY.630.000774
ORF1ab/nsp4498V498VgtTgtC22B.1.177.40.000422
ORF1ab/nsp4498V498VgtTgtC22B.1.177.860.000367
ORF1ab/nsp4498V498VgtTgtC22B.1.351.30.001753
ORF1ab/nsp4498V498VgtTgtC22B.1.595.30.052632
ORF1ab/nsp4498V498VgtTgtC11AY.1000.000046
ORF1ab/nsp4498V498VgtTgtC11AY.160.00038
ORF1ab/nsp4498V498VgtTgtA11AY.260.000028
ORF1ab/nsp4498V498VgtTgtC11AY.390.000025
ORF1ab/nsp4498V498VgtTgtA11AY.4.20.000022
ORF1ab/nsp4498V498VgtTgtC11AY.420.00004
ORF1ab/nsp4498V498VgtTgtC11AY.46.40.000165
ORF1ab/nsp4498V498VgtTgtC11AY.50.000021
ORF1ab/nsp4498V498VgtTgtC11AY.610.000105
ORF1ab/nsp4498V498VgtTgtC11AY.850.000427
ORF1ab/nsp4498V498VgtTgtC11AY.99.20.000092
ORF1ab/nsp4498V498VgtTgtA11B.1.1.2770.000759
ORF1ab/nsp4498V498VgtTgtC11B.1.1.2840.000107
ORF1ab/nsp4498V498VgtTgtA11B.1.1.3510.002793
ORF1ab/nsp4498V498VgtTgtC11B.1.1.4110.014706
ORF1ab/nsp4498V498VgtTgtC11B.1.177.230.003236
ORF1ab/nsp4498V498VgtTgtG11B.1.177.430.001477
ORF1ab/nsp4498V498VgtTgtC11B.1.177.770.000726
ORF1ab/nsp4498V498VgtTgtC11B.1.221.40.004167
ORF1ab/nsp4498V498VgtTgtC11B.1.2340.000132
ORF1ab/nsp4498V498VgtTgtC11B.1.3620.001541
ORF1ab/nsp4498V498VgtTgtC11B.1.400.10.015152
ORF1ab/nsp4498V498VgtTgtG11B.1.4970.000315
ORF1ab/nsp4498V498VgtTgtC11B.1.499.10.111111
ORF1ab/nsp4498V498VgtTgtC11B.1.5960.000087
ORF1ab/nsp4498V498VgtTgtC11B.1.617.10.000129
ORF1ab/nsp4498V498VgtTgtG11B.1.6270.00202
ORF1ab/nsp4498V498VgtTgtC11B.100.008264
ORF1ab/nsp4498V498VgtTgtC11C.1.20.004255
ORF1ab/nsp4498V498VgtTgtC11C.300.001727
ORF1ab/nsp4498V498VgtTgtC11C.37.10.002618
ORF1ab/nsp4498V498VgtTgtC11Q.80.000165