CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp4 | 192 | V192V | V2955V | syn | gtG | gtT | 7464 | 7296 | 0.977492 | 9128-9130 |
ORF1ab/nsp4 | 192 | V192V | V2955V | syn | gtG | gtA | 7464 | 136 | 0.0182208 | 9128-9130 |
ORF1ab/nsp4 | 192 | V192V | V2955V | syn | gtG | gtC | 7464 | 32 | 0.00428725 | 9128-9130 |
Details of the mutation V192V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 7296 | 7464 | All | 0.001395 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 136 | 7464 | All | 0.000026 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 32 | 7464 | All | 0.000006 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1840 | 1840 | B.1.1.39 | 0.937819 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 734 | 761 | B.1.1.7 | 0.000657 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 27 | 761 | B.1.1.7 | 0.000024 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 527 | 528 | AY.103 | 0.003272 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 528 | AY.103 | 0.000006 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 464 | 475 | B.1.617.2 | 0.001747 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 9 | 475 | B.1.617.2 | 0.000034 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 2 | 475 | B.1.617.2 | 0.000008 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 415 | 437 | AY.4 | 0.000646 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 17 | 437 | AY.4 | 0.000026 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 5 | 437 | AY.4 | 0.000008 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 429 | 429 | B.1.177.24 | 0.555699 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 275 | 277 | AY.43 | 0.001218 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 277 | AY.43 | 0.000004 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 277 | AY.43 | 0.000004 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 225 | 225 | AY.1 | 0.089038 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 167 | 171 | B.1 | 0.00153 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 2 | 171 | B.1 | 0.000018 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 2 | 171 | B.1 | 0.000018 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 147 | 148 | P.1.14 | 0.007027 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 148 | P.1.14 | 0.000048 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 138 | 142 | AY.44 | 0.00084 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 3 | 142 | AY.44 | 0.000018 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 142 | AY.44 | 0.000006 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 123 | 126 | B.1.1 | 0.002231 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 2 | 126 | B.1.1 | 0.000036 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 126 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 90 | 90 | B.1.1.277 | 0.068285 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 81 | 81 | B.1.596 | 0.007058 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 61 | 64 | B.1.160 | 0.001902 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 3 | 64 | B.1.160 | 0.000094 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 64 | 64 | B.1.177 | 0.000843 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 57 | 60 | AY.25 | 0.000343 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 3 | 60 | AY.25 | 0.000018 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 55 | 55 | AY.102 | 0.001458 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 54 | 55 | B.1.1.37 | 0.010415 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 55 | B.1.1.37 | 0.000193 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 47 | 52 | B.1.2 | 0.000414 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 5 | 52 | B.1.2 | 0.000044 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 50 | 50 | B.1.1.519 | 0.001986 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 47 | 47 | P.1 | 0.00074 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 43 | 43 | AY.46.5 | 0.008532 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 43 | 43 | AY.9.2 | 0.001579 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 42 | 42 | B.1.258 | 0.002795 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 39 | 39 | P.1.17 | 0.006309 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 30 | 36 | AY.39 | 0.000741 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 6 | 36 | AY.39 | 0.000148 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 32 | 33 | AY.20 | 0.001244 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 33 | AY.20 | 0.000039 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 31 | 31 | B.1.466.2 | 0.012128 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 29 | 29 | B.1.214.2 | 0.017386 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 26 | 26 | B.1.351 | 0.000773 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 26 | 26 | B.1.526 | 0.000611 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 21 | 25 | AY.26 | 0.000595 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 4 | 25 | AY.26 | 0.000113 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 18 | 25 | AY.3 | 0.000179 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 6 | 25 | AY.3 | 0.00006 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 25 | AY.3 | 0.00001 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 25 | 25 | AY.42 | 0.001006 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 22 | 23 | AY.59 | 0.011653 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 23 | AY.59 | 0.00053 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 20 | 22 | AY.47 | 0.000622 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 2 | 22 | AY.47 | 0.000062 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 20 | 20 | AY.46 | 0.002082 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 19 | 19 | B.1.396 | 0.013409 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 18 | 18 | AY.29 | 0.000284 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 17 | 18 | AY.5 | 0.000351 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 18 | AY.5 | 0.000021 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 17 | 17 | AY.61 | 0.001781 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 17 | 17 | B.1.1.302 | 0.03527 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 16 | 16 | AY.4.2 | 0.000347 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 15 | 15 | AY.106 | 0.005023 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 15 | 15 | AY.120 | 0.000558 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 14 | 14 | AQ.1 | 1 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 14 | 14 | AY.3.1 | 0.001194 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 14 | 14 | B.1.1.432 | 0.017722 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 12 | 14 | B.1.234 | 0.001583 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 14 | B.1.234 | 0.000264 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 14 | 14 | B.1.631 | 0.047138 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 13 | 13 | B.1.582 | 0.006379 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 12 | 12 | AY.37 | 0.003793 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 11 | 11 | B.1.1.266 | 0.134146 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 11 | 11 | B.1.221 | 0.000781 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 8 | 10 | AY.45 | 0.000973 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 2 | 10 | AY.45 | 0.000243 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 10 | 10 | AY.54 | 0.000953 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 10 | 10 | B.1.1.216 | 0.008905 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 10 | 10 | B.1.177.52 | 0.017575 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 8 | 10 | B.1.429 | 0.000188 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 2 | 10 | B.1.429 | 0.000047 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 9 | 10 | B.1.525 | 0.001018 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 10 | B.1.525 | 0.000113 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 9 | 9 | AQ.2 | 1 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 9 | 9 | AY.36 | 0.001334 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 9 | 9 | B.1.1.157 | 0.008219 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 9 | 9 | B.1.1.189 | 0.013616 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 8 | 8 | AY.113 | 0.001139 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 7 | 8 | AY.119 | 0.000247 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 8 | AY.119 | 0.000035 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 8 | AY.27 | 0.000324 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 3 | 8 | AY.27 | 0.000194 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 8 | 8 | AY.29.1 | 0.001764 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 8 | 8 | AY.7.1 | 0.000902 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 8 | 8 | B.1.1.222 | 0.001632 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 7 | 7 | AY.110 | 0.000789 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 7 | 7 | AY.117 | 0.000592 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 7 | 7 | AY.12 | 0.002212 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 7 | 7 | AY.16 | 0.002658 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 7 | 7 | B.1.206 | 0.00571 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 7 | 7 | B.1.617.1 | 0.000903 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 7 | 7 | B.1.625 | 0.016471 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 6 | 6 | AY.109 | 0.004438 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 6 | 6 | AY.34.1 | 0.00306 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 6 | 6 | AY.98.1 | 0.000291 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 6 | 6 | B.1.177.81 | 0.001136 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 6 | 6 | B.1.177.86 | 0.001101 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 3 | 6 | P.1.15 | 0.000697 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 6 | P.1.15 | 0.000465 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 6 | P.1.15 | 0.000232 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 5 | AY.13 | 0.000805 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 5 | AY.28 | 0.009452 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 5 | B.1.104 | 0.01845 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 5 | 5 | Q.8 | 0.000825 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | AY.104 | 0.007937 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | AY.16.1 | 0.00188 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 4 | B.1.1.214 | 0.000166 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 4 | B.1.1.214 | 0.000055 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | B.1.1.311 | 0.001433 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 4 | B.1.258.17 | 0.000208 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 2 | 4 | B.1.258.17 | 0.000208 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | B.1.469 | 0.01444 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | B.1.509 | 0.003463 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 3 | 4 | B.1.561 | 0.001191 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 4 | B.1.561 | 0.000397 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 4 | 4 | B.1.621 | 0.000354 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.107 | 0.001398 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 3 | AY.118 | 0.000125 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 3 | AY.118 | 0.000063 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.14 | 0.000264 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.35 | 0.000699 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.70 | 0.000626 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.86 | 0.00249 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | AY.99 | 0.003148 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | B.1.1.231 | 0.009288 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | B.1.1.50 | 0.002037 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | B.1.160.32 | 0.012876 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | B.1.177.19 | 0.004292 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 3 | B.1.416 | 0.002538 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 3 | B.1.416 | 0.001269 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | Q.2 | 0.00184 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 3 | 3 | R.1 | 0.00027 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | 0.111111 | |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | A.29 | 0.010638 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.60 | 0.001876 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.68 | 0.000547 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B | 0.000256 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.1.244 | 0.030769 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.1.367 | 0.111111 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.1.464 | 0.002946 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.110.3 | 0.001437 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 2 | 2 | B.1.177.32 | 0.002699 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.236 | 0.004107 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.36.19 | 0.018519 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.366 | 0.009756 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.425 | 0.005988 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 2 | 2 | B.23 | 0.005848 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtA | 1 | 1 | B.1.1.113 | 0.006993 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.135 | 0.004695 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.163 | 0.007634 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.236 | 0.006897 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.255 | 0.00303 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.268 | 0.014925 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.290 | 0.018182 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.296 | 0.018182 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.335 | 0.012987 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.513 | 0.012346 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.71 | 0.006061 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.1.89 | 0.006061 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.158 | 0.02381 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.160.10 | 0.008065 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.160.29 | 0.004219 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.166 | 0.008475 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.46 | 0.000918 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.71 | 0.010101 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.74 | 0.015152 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 1 | B.1.36.34 | 0.021277 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.466.1 | 0.007194 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.1.9 | 0.006173 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtC | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp4 | 192 | V192V | gtG | gtT | 1 | 1 | W.4 | 0.001351 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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