CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = V180V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4180V180VV2943VsyngtTgtC2401580.6583339092-9094
ORF1ab/nsp4180V180VV2943VsyngtTgtG240480.29092-9094
ORF1ab/nsp4180V180VV2943VsyngtTgtA240340.1416679092-9094

Details of the mutation V180V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4180V180VgtTgtC158240All0.00003
ORF1ab/nsp4180V180VgtTgtG48240All0.000009
ORF1ab/nsp4180V180VgtTgtA34240All0.000007
ORF1ab/nsp4180V180VgtTgtC4444AY.1030.000273
ORF1ab/nsp4180V180VgtTgtC4242AY.330.002805
ORF1ab/nsp4180V180VgtTgtG2020B.1.438.10.002145
ORF1ab/nsp4180V180VgtTgtC618B.1.1.70.000005
ORF1ab/nsp4180V180VgtTgtG618B.1.1.70.000005
ORF1ab/nsp4180V180VgtTgtA618B.1.1.70.000005
ORF1ab/nsp4180V180VgtTgtC1616B.1.1.2840.001718
ORF1ab/nsp4180V180VgtTgtC711AY.40.000011
ORF1ab/nsp4180V180VgtTgtA411AY.40.000006
ORF1ab/nsp4180V180VgtTgtC79B.1.617.20.000026
ORF1ab/nsp4180V180VgtTgtA29B.1.617.20.000008
ORF1ab/nsp4180V180VgtTgtG480.222222
ORF1ab/nsp4180V180VgtTgtA280.111111
ORF1ab/nsp4180V180VgtTgtC280.111111
ORF1ab/nsp4180V180VgtTgtA46AY.430.000018
ORF1ab/nsp4180V180VgtTgtC26AY.430.000009
ORF1ab/nsp4180V180VgtTgtC66AY.46.30.005602
ORF1ab/nsp4180V180VgtTgtC44AY.980.000316
ORF1ab/nsp4180V180VgtTgtG24B.1.10.000036
ORF1ab/nsp4180V180VgtTgtC14B.1.10.000018
ORF1ab/nsp4180V180VgtTgtA14B.1.10.000018
ORF1ab/nsp4180V180VgtTgtG44B.1.160.90.028777
ORF1ab/nsp4180V180VgtTgtA34B.1.5260.000071
ORF1ab/nsp4180V180VgtTgtC14B.1.5260.000024
ORF1ab/nsp4180V180VgtTgtA24P.10.000032
ORF1ab/nsp4180V180VgtTgtC24P.10.000032
ORF1ab/nsp4180V180VgtTgtC33A.10.000846
ORF1ab/nsp4180V180VgtTgtG33AY.160.001139
ORF1ab/nsp4180V180VgtTgtC22AY.1160.000574
ORF1ab/nsp4180V180VgtTgtA12AY.290.000016
ORF1ab/nsp4180V180VgtTgtC12AY.290.000016
ORF1ab/nsp4180V180VgtTgtC22AY.39.10.000079
ORF1ab/nsp4180V180VgtTgtG22AY.46.50.000397
ORF1ab/nsp4180V180VgtTgtA12B.1.20.000009
ORF1ab/nsp4180V180VgtTgtC12B.1.20.000009
ORF1ab/nsp4180V180VgtTgtA12B.1.4270.00005
ORF1ab/nsp4180V180VgtTgtG12B.1.4270.00005
ORF1ab/nsp4180V180VgtTgtA12B.1.4290.000024
ORF1ab/nsp4180V180VgtTgtG12B.1.4290.000024
ORF1ab/nsp4180V180VgtTgtA22B.1.5750.000607
ORF1ab/nsp4180V180VgtTgtG22P.1.100.000539
ORF1ab/nsp4180V180VgtTgtC11AY.1190.000035
ORF1ab/nsp4180V180VgtTgtC11AY.250.000006
ORF1ab/nsp4180V180VgtTgtC11AY.390.000025
ORF1ab/nsp4180V180VgtTgtC11AY.440.000006
ORF1ab/nsp4180V180VgtTgtC11AY.450.000122
ORF1ab/nsp4180V180VgtTgtA11AY.50.000021
ORF1ab/nsp4180V180VgtTgtC11AY.70.000196
ORF1ab/nsp4180V180VgtTgtG11AY.90.000068
ORF1ab/nsp4180V180VgtTgtA11B.10.000009
ORF1ab/nsp4180V180VgtTgtC11B.1.1.4320.001266
ORF1ab/nsp4180V180VgtTgtA11B.1.1.440.00241
ORF1ab/nsp4180V180VgtTgtC11B.1.1.5190.00004
ORF1ab/nsp4180V180VgtTgtA11B.1.1600.000031
ORF1ab/nsp4180V180VgtTgtC11B.1.3970.004854
ORF1ab/nsp4180V180VgtTgtG11B.1.4220.000812
ORF1ab/nsp4180V180VgtTgtG11B.1.6210.000089