CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = V180L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4180V180LV2943LnonsynGttCtt20120.69092-9094
ORF1ab/nsp4180V180LV2943LnonsynGtTCtG2040.29092-9094
ORF1ab/nsp4180V180LV2943LnonsynGtTCtC2020.19092-9094
ORF1ab/nsp4180V180LV2943LnonsynGtTCtA2020.19092-9094

Details of the mutation V180L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4180V180LGttCtt1220All0.000002
ORF1ab/nsp4180V180LGtTCtG420All0.000001
ORF1ab/nsp4180V180LGtTCtA220All0
ORF1ab/nsp4180V180LGtTCtC220All0
ORF1ab/nsp4180V180LGttCtt4120.222222
ORF1ab/nsp4180V180LGtTCtG4120.222222
ORF1ab/nsp4180V180LGtTCtA2120.111111
ORF1ab/nsp4180V180LGtTCtC2120.111111
ORF1ab/nsp4180V180LGttCtt22AY.240.000862
ORF1ab/nsp4180V180LGttCtt11AY.100.00053
ORF1ab/nsp4180V180LGttCtt11B0.000128
ORF1ab/nsp4180V180LGttCtt11B.1.1.2160.00089
ORF1ab/nsp4180V180LGttCtt11B.1.177.870.000728
ORF1ab/nsp4180V180LGttCtt11D.20.000075
ORF1ab/nsp4180V180LGttCtt11Q.40.000455