CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T73T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp473T73TT2836TsynacAacG8287480.9033828771-8773
ORF1ab/nsp473T73TT2836TsynacAacT828600.07246388771-8773
ORF1ab/nsp473T73TT2836TsynacAacC828200.02415468771-8773

Details of the mutation T73T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp473T73TacAacG748828All0.000143
ORF1ab/nsp473T73TacAacT60828All0.000011
ORF1ab/nsp473T73TacAacC20828All0.000004
ORF1ab/nsp473T73TacAacG219219B.1.5050.960526
ORF1ab/nsp473T73TacAacG159160B.1.617.20.000599
ORF1ab/nsp473T73TacAacT1160B.1.617.20.000004
ORF1ab/nsp473T73TacAacG5960B.1.20.00052
ORF1ab/nsp473T73TacAacT160B.1.20.000009
ORF1ab/nsp473T73TacAacG4950AY.430.000217
ORF1ab/nsp473T73TacAacT150AY.430.000004
ORF1ab/nsp473T73TacAacG4646AY.690.008587
ORF1ab/nsp473T73TacAacT3434AY.90.002298
ORF1ab/nsp473T73TacAacG2328B.1.1.70.000021
ORF1ab/nsp473T73TacAacT328B.1.1.70.000003
ORF1ab/nsp473T73TacAacC228B.1.1.70.000002
ORF1ab/nsp473T73TacAacG2122B.1.2430.001461
ORF1ab/nsp473T73TacAacT122B.1.2430.00007
ORF1ab/nsp473T73TacAacG2021AY.40.000031
ORF1ab/nsp473T73TacAacT121AY.40.000002
ORF1ab/nsp473T73TacAacG1919AY.30.000189
ORF1ab/nsp473T73TacAacG1717AY.9.20.000624
ORF1ab/nsp473T73TacAacG1516AY.440.000091
ORF1ab/nsp473T73TacAacT116AY.440.000006
ORF1ab/nsp473T73TacAacG1313AY.250.000078
ORF1ab/nsp473T73TacAacG913B.10.000082
ORF1ab/nsp473T73TacAacC313B.10.000027
ORF1ab/nsp473T73TacAacT113B.10.000009
ORF1ab/nsp473T73TacAacG77AY.390.000173
ORF1ab/nsp473T73TacAacG77B.1.2580.000466
ORF1ab/nsp473T73TacAacC67P.1.140.000287
ORF1ab/nsp473T73TacAacT17P.1.140.000048
ORF1ab/nsp473T73TacAacG56B.1.438.10.000536
ORF1ab/nsp473T73TacAacC16B.1.438.10.000107
ORF1ab/nsp473T73TacAacG35P.10.000047
ORF1ab/nsp473T73TacAacT25P.10.000032
ORF1ab/nsp473T73TacAacG34AY.1020.00008
ORF1ab/nsp473T73TacAacC14AY.1020.000027
ORF1ab/nsp473T73TacAacG34AY.260.000085
ORF1ab/nsp473T73TacAacC14AY.260.000028
ORF1ab/nsp473T73TacAacG44AY.450.000487
ORF1ab/nsp473T73TacAacG34B.1.10.000054
ORF1ab/nsp473T73TacAacT14B.1.10.000018
ORF1ab/nsp473T73TacAacG44B.1.1770.000053
ORF1ab/nsp473T73TacAacC330.166667
ORF1ab/nsp473T73TacAacG33AY.1030.000019
ORF1ab/nsp473T73TacAacG33AY.1180.000188
ORF1ab/nsp473T73TacAacG33AY.330.0002
ORF1ab/nsp473T73TacAacG33AY.39.10.000119
ORF1ab/nsp473T73TacAacT33B.1.258.170.000312
ORF1ab/nsp473T73TacAacG23B.1.4290.000047
ORF1ab/nsp473T73TacAacT13B.1.4290.000024
ORF1ab/nsp473T73TacAacG22AY.1100.000225
ORF1ab/nsp473T73TacAacG22AY.23.10.000835
ORF1ab/nsp473T73TacAacG22B.1.177.810.000379
ORF1ab/nsp473T73TacAacT22B.1.351.20.000605
ORF1ab/nsp473T73TacAacG22P.1.120.000968
ORF1ab/nsp473T73TacAacG11AY.110.001339
ORF1ab/nsp473T73TacAacG11AY.1160.000287
ORF1ab/nsp473T73TacAacG11AY.1190.000035
ORF1ab/nsp473T73TacAacT11AY.1200.000037
ORF1ab/nsp473T73TacAacG11AY.130.000161
ORF1ab/nsp473T73TacAacG11AY.290.000016
ORF1ab/nsp473T73TacAacC11AY.4.20.000022
ORF1ab/nsp473T73TacAacG11AY.410.000294
ORF1ab/nsp473T73TacAacC11AY.470.000031
ORF1ab/nsp473T73TacAacT11AY.540.000095
ORF1ab/nsp473T73TacAacG11AY.60.000041
ORF1ab/nsp473T73TacAacG11AY.650.000533
ORF1ab/nsp473T73TacAacT11AY.75.10.00018
ORF1ab/nsp473T73TacAacG11AY.98.10.000048
ORF1ab/nsp473T73TacAacG11AY.99.20.000092
ORF1ab/nsp473T73TacAacG11B.1.1.3480.000796
ORF1ab/nsp473T73TacAacT11B.1.160.100.008065
ORF1ab/nsp473T73TacAacG11B.1.2340.000132
ORF1ab/nsp473T73TacAacT11B.1.3510.00003
ORF1ab/nsp473T73TacAacG11B.1.4970.000315
ORF1ab/nsp473T73TacAacG11B.1.5260.000024
ORF1ab/nsp473T73TacAacT11B.1.5510.00129
ORF1ab/nsp473T73TacAacG11B.1.5960.000087
ORF1ab/nsp473T73TacAacG11B.1.617.10.000129
ORF1ab/nsp473T73TacAacG11B.1.617.30.002985
ORF1ab/nsp473T73TacAacC11B.1.930.000934
ORF1ab/nsp473T73TacAacG11C.350.000774