CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T492A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4492T492AT3255AnonsynAccGcc3013000.99667810028-10030
ORF1ab/nsp4492T492AT3255AnonsynAcCGcT30110.0033222610028-10030

Details of the mutation T492A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4492T492AAccGcc300301All0.000057
ORF1ab/nsp4492T492AAcCGcT1301All0
ORF1ab/nsp4492T492AAccGcc7575B.1.36.20.806452
ORF1ab/nsp4492T492AAccGcc2828B.1.1770.000369
ORF1ab/nsp4492T492AAccGcc2626B.1.1600.000811
ORF1ab/nsp4492T492AAccGcc2323B.1.20.000203
ORF1ab/nsp4492T492AAccGcc1717B.1.177.860.003119
ORF1ab/nsp4492T492AAccGcc1616B.10.000147
ORF1ab/nsp4492T492AAccGcc1414B.1.1.70.000013
ORF1ab/nsp4492T492AAccGcc1212B.1.2210.000852
ORF1ab/nsp4492T492AAccGcc1010B.1.177.520.017575
ORF1ab/nsp4492T492AAccGcc99AY.570.005906
ORF1ab/nsp4492T492AAccGcc88B.1.177.70.001319
ORF1ab/nsp4492T492AAccGcc55B.1.4290.000118
ORF1ab/nsp4492T492AAccGcc44B.1.10.000073
ORF1ab/nsp4492T492AAccGcc44B.1.3430.083333
ORF1ab/nsp4492T492AAccGcc44B.1.5960.000349
ORF1ab/nsp4492T492AAccGcc33B.1.1.3190.052632
ORF1ab/nsp4492T492AAccGcc33B.1.1.330.001263
ORF1ab/nsp4492T492AAccGcc33B.1.160.280.008772
ORF1ab/nsp4492T492AAccGcc33B.1.177.120.000455
ORF1ab/nsp4492T492AAccGcc33B.1.5740.006452
ORF1ab/nsp4492T492AAccGcc33P.10.000047
ORF1ab/nsp4492T492AAccGcc22B.1.2580.000133
ORF1ab/nsp4492T492AAccGcc22B.1.4040.002604
ORF1ab/nsp4492T492AAccGcc11A.2.20.001689
ORF1ab/nsp4492T492AAccGcc11AY.270.000065
ORF1ab/nsp4492T492AAccGcc11AY.620.000436
ORF1ab/nsp4492T492AAccGcc11B.1.1.2140.000055
ORF1ab/nsp4492T492AAccGcc11B.1.1.250.000569
ORF1ab/nsp4492T492AAccGcc11B.1.1.4340.000349
ORF1ab/nsp4492T492AAccGcc11B.1.177.100.000878
ORF1ab/nsp4492T492AAccGcc11B.1.177.240.001295
ORF1ab/nsp4492T492AAccGcc11B.1.2390.001221
ORF1ab/nsp4492T492AAccGcc11B.1.3510.00003
ORF1ab/nsp4492T492AAccGcc11B.1.3750.00082
ORF1ab/nsp4492T492AAccGcc11B.1.3970.004854
ORF1ab/nsp4492T492AAccGcc11B.1.438.10.000107
ORF1ab/nsp4492T492AAccGcc11B.1.4460.02
ORF1ab/nsp4492T492AAccGcc11B.1.4680.005714
ORF1ab/nsp4492T492AAccGcc11B.1.4740.001901
ORF1ab/nsp4492T492AAccGcc11B.1.5600.00463
ORF1ab/nsp4492T492AAcCGcT11B.1.5770.000687
ORF1ab/nsp4492T492AAccGcc11B.1.6090.000479
ORF1ab/nsp4492T492AAccGcc11B.1.617.20.000004
ORF1ab/nsp4492T492AAccGcc11B.1.930.000934
ORF1ab/nsp4492T492AAccGcc11B.400.000364
ORF1ab/nsp4492T492AAccGcc11B.580.010204
ORF1ab/nsp4492T492AAccGcc11C.350.000774