CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T37T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp437T37TT2800TsynacTacC3111790.5755638663-8665
ORF1ab/nsp437T37TT2800TsynacTacA311820.2636668663-8665
ORF1ab/nsp437T37TT2800TsynacTacG311500.1607728663-8665

Details of the mutation T37T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp437T37TacTacC179311All0.000034
ORF1ab/nsp437T37TacTacA82311All0.000016
ORF1ab/nsp437T37TacTacG50311All0.00001
ORF1ab/nsp437T37TacTacC7274AY.40.000112
ORF1ab/nsp437T37TacTacA174AY.40.000002
ORF1ab/nsp437T37TacTacG174AY.40.000002
ORF1ab/nsp437T37TacTacG3436AY.440.000207
ORF1ab/nsp437T37TacTacC236AY.440.000012
ORF1ab/nsp437T37TacTacC2828B.1.1770.000369
ORF1ab/nsp437T37TacTacA2121AY.850.008971
ORF1ab/nsp437T37TacTacC1319B.1.1.70.000012
ORF1ab/nsp437T37TacTacA619B.1.1.70.000005
ORF1ab/nsp437T37TacTacA910B.1.10.000163
ORF1ab/nsp437T37TacTacG110B.1.10.000018
ORF1ab/nsp437T37TacTacC78AY.290.00011
ORF1ab/nsp437T37TacTacA18AY.290.000016
ORF1ab/nsp437T37TacTacC88B.1.3110.002197
ORF1ab/nsp437T37TacTacC37AY.30.00003
ORF1ab/nsp437T37TacTacG37AY.30.00003
ORF1ab/nsp437T37TacTacA17AY.30.00001
ORF1ab/nsp437T37TacTacA77B.1.1.4200.007042
ORF1ab/nsp437T37TacTacC66AY.1000.000276
ORF1ab/nsp437T37TacTacA55AY.390.000124
ORF1ab/nsp437T37TacTacG45AY.50.000083
ORF1ab/nsp437T37TacTacC15AY.50.000021
ORF1ab/nsp437T37TacTacG35B.10.000027
ORF1ab/nsp437T37TacTacA15B.10.000009
ORF1ab/nsp437T37TacTacC15B.10.000009
ORF1ab/nsp437T37TacTacC35B.1.617.20.000011
ORF1ab/nsp437T37TacTacA25B.1.617.20.000008
ORF1ab/nsp437T37TacTacC240.111111
ORF1ab/nsp437T37TacTacA240.111111
ORF1ab/nsp437T37TacTacA34AY.1030.000019
ORF1ab/nsp437T37TacTacC14AY.1030.000006
ORF1ab/nsp437T37TacTacC23AY.200.000078
ORF1ab/nsp437T37TacTacA13AY.200.000039
ORF1ab/nsp437T37TacTacA33AY.300.001187
ORF1ab/nsp437T37TacTacA23AY.430.000009
ORF1ab/nsp437T37TacTacC13AY.430.000004
ORF1ab/nsp437T37TacTacA12AY.23.10.000417
ORF1ab/nsp437T37TacTacC12AY.23.10.000417
ORF1ab/nsp437T37TacTacC22AY.450.000243
ORF1ab/nsp437T37TacTacC22AY.740.000231
ORF1ab/nsp437T37TacTacA22B.1.1.2630.003115
ORF1ab/nsp437T37TacTacG22B.1.1.3170.000823
ORF1ab/nsp437T37TacTacA22B.1.20.000018
ORF1ab/nsp437T37TacTacC22B.1.2210.000142
ORF1ab/nsp437T37TacTacC22B.1.5260.000047
ORF1ab/nsp437T37TacTacC22D.20.00015
ORF1ab/nsp437T37TacTacC11A.2.40.003367
ORF1ab/nsp437T37TacTacC11AY.1190.000035
ORF1ab/nsp437T37TacTacA11AY.1210.000135
ORF1ab/nsp437T37TacTacC11AY.230.00007
ORF1ab/nsp437T37TacTacA11AY.250.000006
ORF1ab/nsp437T37TacTacA11AY.330.000067
ORF1ab/nsp437T37TacTacA11AY.34.10.00051
ORF1ab/nsp437T37TacTacA11AY.39.20.001541
ORF1ab/nsp437T37TacTacC11AY.4.20.000022
ORF1ab/nsp437T37TacTacA11AY.460.000104
ORF1ab/nsp437T37TacTacC11AY.46.20.000635
ORF1ab/nsp437T37TacTacA11AY.5.30.000337
ORF1ab/nsp437T37TacTacC11AY.550.000917
ORF1ab/nsp437T37TacTacC11AY.75.10.00018
ORF1ab/nsp437T37TacTacG11AY.800.001129
ORF1ab/nsp437T37TacTacA11AY.9.20.000037
ORF1ab/nsp437T37TacTacA11AY.920.000287
ORF1ab/nsp437T37TacTacC11B0.000128
ORF1ab/nsp437T37TacTacC11B.1.1.3770.001381
ORF1ab/nsp437T37TacTacC11B.1.1.5190.00004
ORF1ab/nsp437T37TacTacG11B.1.177.810.000189
ORF1ab/nsp437T37TacTacC11B.1.36.310.001751
ORF1ab/nsp437T37TacTacA11B.1.3690.000285
ORF1ab/nsp437T37TacTacC11B.1.4290.000024
ORF1ab/nsp437T37TacTacA11B.1.466.20.000391
ORF1ab/nsp437T37TacTacC11B.1.5900.004545
ORF1ab/nsp437T37TacTacC11B.1.6060.006024
ORF1ab/nsp437T37TacTacC11B.1.6190.000871
ORF1ab/nsp437T37TacTacC11P.10.000016
ORF1ab/nsp437T37TacTacC11P.1.140.000048
ORF1ab/nsp437T37TacTacA11P.50.013699
ORF1ab/nsp437T37TacTacC11Q.10.000126