CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T37S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp437T37ST2800SnonsynaCtaGt23140.6086968663-8665
ORF1ab/nsp437T37ST2800SnonsynActTct2370.3043488663-8665
ORF1ab/nsp437T37ST2800SnonsynaCTaGC2320.08695658663-8665

Details of the mutation T37S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp437T37SaCtaGt1423All0.000003
ORF1ab/nsp437T37SActTct723All0.000001
ORF1ab/nsp437T37SaCTaGC223All0
ORF1ab/nsp437T37SaCtaGt240.111111
ORF1ab/nsp437T37SaCTaGC240.111111
ORF1ab/nsp437T37SaCtaGt34AY.440.000018
ORF1ab/nsp437T37SActTct14AY.440.000006
ORF1ab/nsp437T37SaCtaGt44B.1.4290.000094
ORF1ab/nsp437T37SActTct23B.10.000018
ORF1ab/nsp437T37SaCtaGt13B.10.000009
ORF1ab/nsp437T37SActTct11AY.1180.000063
ORF1ab/nsp437T37SActTct11AY.230.00007
ORF1ab/nsp437T37SaCtaGt11AY.23.10.000417
ORF1ab/nsp437T37SaCtaGt11AY.330.000067
ORF1ab/nsp437T37SActTct11B.1.10.000018
ORF1ab/nsp437T37SaCtaGt11B.1.2600.003344
ORF1ab/nsp437T37SActTct11B.1.3960.000706
ORF1ab/nsp437T37SaCtaGt11D.20.000075