CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T319del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4319T319delT3082deldelACT---26826819509-9511

Details of the mutation T319del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4319T319delACT---268268All0.000051
ORF1ab/nsp4319T319delACT---130130B.1.1.70.000116
ORF1ab/nsp4319T319delACT---2323B.1.1770.000303
ORF1ab/nsp4319T319delACT---2020AY.40.000031
ORF1ab/nsp4319T319delACT---88AY.4.50.00086
ORF1ab/nsp4319T319delACT---55AY.430.000022
ORF1ab/nsp4319T319delACT---55B.1.617.20.000019
ORF1ab/nsp4319T319delACT---44AY.250.000024
ORF1ab/nsp4319T319delACT---44B.1.20.000035
ORF1ab/nsp4319T319delACT---33B.1.10.000054
ORF1ab/nsp4319T319delACT---33B.1.177.40.000633
ORF1ab/nsp4319T319delACT---33B.1.177.870.002183
ORF1ab/nsp4319T319delACT---22AY.1110.000366
ORF1ab/nsp4319T319delACT---22AY.1200.000074
ORF1ab/nsp4319T319delACT---22AY.190.002281
ORF1ab/nsp4319T319delACT---22AY.260.000057
ORF1ab/nsp4319T319delACT---22AY.46.20.001271
ORF1ab/nsp4319T319delACT---22AY.60.000082
ORF1ab/nsp4319T319delACT---22AY.90.000135
ORF1ab/nsp4319T319delACT---22B.1.1.3110.000716
ORF1ab/nsp4319T319delACT---22B.1.1.3120.003824
ORF1ab/nsp4319T319delACT---22B.1.177.160.001329
ORF1ab/nsp4319T319delACT---22B.1.177.180.00232
ORF1ab/nsp4319T319delACT---11AD.20.000219
ORF1ab/nsp4319T319delACT---11AY.4.20.000022
ORF1ab/nsp4319T319delACT---11AY.420.00004
ORF1ab/nsp4319T319delACT---11AY.440.000006
ORF1ab/nsp4319T319delACT---11AY.5.30.000337
ORF1ab/nsp4319T319delACT---11AY.600.000938
ORF1ab/nsp4319T319delACT---11AY.780.001541
ORF1ab/nsp4319T319delACT---11AY.990.001049
ORF1ab/nsp4319T319delACT---11AY.99.10.001553
ORF1ab/nsp4319T319delACT---11B.10.000009
ORF1ab/nsp4319T319delACT---11B.1.1.1390.022727
ORF1ab/nsp4319T319delACT---11B.1.1.3610.045455
ORF1ab/nsp4319T319delACT---11B.1.1.370.000193
ORF1ab/nsp4319T319delACT---11B.1.1.4200.001006
ORF1ab/nsp4319T319delACT---11B.1.1.700.000341
ORF1ab/nsp4319T319delACT---11B.1.160.230.004831
ORF1ab/nsp4319T319delACT---11B.1.160.70.002079
ORF1ab/nsp4319T319delACT---11B.1.177.110.001698
ORF1ab/nsp4319T319delACT---11B.1.177.150.000631
ORF1ab/nsp4319T319delACT---11B.1.177.190.001431
ORF1ab/nsp4319T319delACT---11B.1.177.20.004545
ORF1ab/nsp4319T319delACT---11B.1.177.540.000606
ORF1ab/nsp4319T319delACT---11B.1.177.580.001332
ORF1ab/nsp4319T319delACT---11B.1.177.690.001484
ORF1ab/nsp4319T319delACT---11B.1.177.90.001332
ORF1ab/nsp4319T319delACT---11B.1.2580.000067
ORF1ab/nsp4319T319delACT---11B.1.258.100.011364
ORF1ab/nsp4319T319delACT---11B.1.36.180.00042
ORF1ab/nsp4319T319delACT---11B.1.3890.001002
ORF1ab/nsp4319T319delACT---11B.1.4150.014286
ORF1ab/nsp4319T319delACT---11B.1.5250.000113
ORF1ab/nsp4319T319delACT---11B.150.017544
ORF1ab/nsp4319T319delACT---11C.170.055556
ORF1ab/nsp4319T319delACT---11C.360.000911
ORF1ab/nsp4319T319delACT---11P.1.100.000269
ORF1ab/nsp4319T319delACT---11Q.10.000126
ORF1ab/nsp4319T319delACT---11Q.20.000613
ORF1ab/nsp4319T319delACT---11U.30.003861