CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T319I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4319T319IT3082InonsynaCtaTt5885870.9982999509-9511
ORF1ab/nsp4319T319IT3082InonsynaCTaTA58810.001700689509-9511

Details of the mutation T319I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4319T319IaCtaTt587588All0.000112
ORF1ab/nsp4319T319IaCTaTA1588All0
ORF1ab/nsp4319T319IaCtaTt164164B.1.1.70.000147
ORF1ab/nsp4319T319IaCtaTt4646AY.40.000072
ORF1ab/nsp4319T319IaCtaTt4646B.1.20.000405
ORF1ab/nsp4319T319IaCtaTt4343B.1.5260.001011
ORF1ab/nsp4319T319IaCtaTt1717AY.1030.000106
ORF1ab/nsp4319T319IaCtaTt1717AY.340.001648
ORF1ab/nsp4319T319IaCtaTt1717B.1.5960.001481
ORF1ab/nsp4319T319IaCtaTt1414AY.39.10.000555
ORF1ab/nsp4319T319IaCtaTt1414B.1.617.20.000053
ORF1ab/nsp4319T319IaCtaTt1313AY.250.000078
ORF1ab/nsp4319T319IaCtaTt1313AY.270.000841
ORF1ab/nsp4319T319IaCtaTt1111AY.390.000272
ORF1ab/nsp4319T319IaCtaTt99AY.430.00004
ORF1ab/nsp4319T319IaCtaTt99B.10.000082
ORF1ab/nsp4319T319IaCtaTt99B.1.1770.000119
ORF1ab/nsp4319T319IaCtaTt99B.1.4290.000212
ORF1ab/nsp4319T319IaCtaTt88B.1.10.000145
ORF1ab/nsp4319T319IaCtaTt77AY.750.000392
ORF1ab/nsp4319T319IaCtaTt66B.1.1.5190.000238
ORF1ab/nsp4319T319IaCtaTt55AY.240.002155
ORF1ab/nsp4319T319IaCtaTt55AY.290.000079
ORF1ab/nsp4319T319IaCtaTt55P.1.170.000809
ORF1ab/nsp4319T319IaCtaTt44AY.1020.000106
ORF1ab/nsp4319T319IaCtaTt44AY.440.000024
ORF1ab/nsp4319T319IaCtaTt44AY.99.20.000369
ORF1ab/nsp4319T319IaCtaTt44B.1.1.750.042553
ORF1ab/nsp4319T319IaCtaTt44B.1.1600.000125
ORF1ab/nsp4319T319IaCtaTt44B.1.5250.000453
ORF1ab/nsp4319T319IaCtaTt33A.270.004967
ORF1ab/nsp4319T319IaCtaTt33AY.16.10.00141
ORF1ab/nsp4319T319IaCtaTt33AY.200.000117
ORF1ab/nsp4319T319IaCtaTt33AY.260.000085
ORF1ab/nsp4319T319IaCtaTt33AY.30.00003
ORF1ab/nsp4319T319IaCtaTt33B.1.6120.007958
ORF1ab/nsp4319T319IaCtaTt33P.10.000047
ORF1ab/nsp4319T319IaCtaTt22AY.120.20.002571
ORF1ab/nsp4319T319IaCtaTt22AY.4.20.000043
ORF1ab/nsp4319T319IaCtaTt22AY.880.001768
ORF1ab/nsp4319T319IaCtaTt22B0.000256
ORF1ab/nsp4319T319IaCtaTt22B.1.1.2140.000111
ORF1ab/nsp4319T319IaCtaTt22B.1.2210.000142
ORF1ab/nsp4319T319IaCtaTt22B.1.3510.000059
ORF1ab/nsp4319T319IaCtaTt22B.1.36.310.003503
ORF1ab/nsp4319T319IaCtaTt22D.20.00015
ORF1ab/nsp4319T319IaCtaTt11AY.1110.000183
ORF1ab/nsp4319T319IaCtaTt11AY.1170.000085
ORF1ab/nsp4319T319IaCtaTt11AY.1200.000037
ORF1ab/nsp4319T319IaCtaTt11AY.330.000067
ORF1ab/nsp4319T319IaCtaTt11AY.370.000316
ORF1ab/nsp4319T319IaCtaTt11AY.420.00004
ORF1ab/nsp4319T319IaCtaTt11AY.460.000104
ORF1ab/nsp4319T319IaCtaTt11AY.470.000031
ORF1ab/nsp4319T319IaCtaTt11AY.50.000021
ORF1ab/nsp4319T319IaCtaTt11AY.570.000656
ORF1ab/nsp4319T319IaCtaTt11AY.580.000907
ORF1ab/nsp4319T319IaCtaTt11AY.680.000274
ORF1ab/nsp4319T319IaCtaTt11AY.980.000079
ORF1ab/nsp4319T319IaCtaTt11B.1.1.100.001115
ORF1ab/nsp4319T319IaCtaTt11B.1.1.1580.012195
ORF1ab/nsp4319T319IaCtaTt11B.1.1.1870.00885
ORF1ab/nsp4319T319IaCtaTt11B.1.1.2220.000204
ORF1ab/nsp4319T319IaCtaTt11B.1.1.2840.000107
ORF1ab/nsp4319T319IaCtaTt11B.1.1.2970.002237
ORF1ab/nsp4319T319IaCtaTt11B.1.1.3260.001761
ORF1ab/nsp4319T319IaCtaTt11B.1.177.190.001431
ORF1ab/nsp4319T319IaCtaTt11B.1.2060.000816
ORF1ab/nsp4319T319IaCtaTt11B.1.2340.000132
ORF1ab/nsp4319T319IaCtaTt11B.1.2400.000216
ORF1ab/nsp4319T319IaCtaTt11B.1.2640.012346
ORF1ab/nsp4319T319IaCtaTt11B.1.360.000146
ORF1ab/nsp4319T319IaCtaTt11B.1.3970.004854
ORF1ab/nsp4319T319IaCtaTt11B.1.4270.00005
ORF1ab/nsp4319T319IaCtaTt11B.1.4590.004082
ORF1ab/nsp4319T319IaCtaTt11B.1.4620.007246
ORF1ab/nsp4319T319IaCtaTt11B.1.466.20.000391
ORF1ab/nsp4319T319IaCtaTt11B.1.4700.001404
ORF1ab/nsp4319T319IaCtaTt11B.1.5610.000397
ORF1ab/nsp4319T319IaCtaTt11B.1.617.10.000129
ORF1ab/nsp4319T319IaCtaTt11B.1.6210.000089
ORF1ab/nsp4319T319IaCtaTt11C.260.007353
ORF1ab/nsp4319T319IaCTaTA11C.350.000774
ORF1ab/nsp4319T319IaCtaTt11D.30.005917