CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T173S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4173T173ST2936SnonsynAccTcc530.69071-9073
ORF1ab/nsp4173T173ST2936SnonsynAcCTcT510.29071-9073
ORF1ab/nsp4173T173ST2936SnonsynaCcaGc510.29071-9073

Details of the mutation T173S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4173T173SAccTcc35All0.000001
ORF1ab/nsp4173T173SAcCTcT15All0
ORF1ab/nsp4173T173SaCcaGc15All0
ORF1ab/nsp4173T173SAccTcc220.111111
ORF1ab/nsp4173T173SAccTcc11AY.440.000006
ORF1ab/nsp4173T173SaCcaGc11B.10.000009
ORF1ab/nsp4173T173SAcCTcT11B.1.1.70.000001