CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T173I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4173T173IT2936InonsynaCcaTc826482460.9978229071-9073
ORF1ab/nsp4173T173IT2936InonsynaCCaTT8264180.002178129071-9073

Details of the mutation T173I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4173T173IaCcaTc82468264All0.001577
ORF1ab/nsp4173T173IaCCaTT188264All0.000003
ORF1ab/nsp4173T173IaCcaTc32813292B.1.1.3180.990042
ORF1ab/nsp4173T173IaCCaTT113292B.1.1.3180.003319
ORF1ab/nsp4173T173IaCcaTc12001201AZ.20.985222
ORF1ab/nsp4173T173IaCCaTT11201AZ.20.000821
ORF1ab/nsp4173T173IaCcaTc11521152AZ.10.999133
ORF1ab/nsp4173T173IaCcaTc655655AZ.30.995441
ORF1ab/nsp4173T173IaCcaTc297297AZ.40.996644
ORF1ab/nsp4173T173IaCcaTc283283AZ.50.992982
ORF1ab/nsp4173T173IaCcaTc213213AY.40.000332
ORF1ab/nsp4173T173IaCcaTc115121AZ.2.10.934959
ORF1ab/nsp4173T173IaCCaTT6121AZ.2.10.04878
ORF1ab/nsp4173T173IaCcaTc119119AZ.61
ORF1ab/nsp4173T173IaCcaTc100100AY.440.000609
ORF1ab/nsp4173T173IaCcaTc9999AY.1110.018132
ORF1ab/nsp4173T173IaCcaTc7272B.1.1.100.080268
ORF1ab/nsp4173T173IaCcaTc6565AY.250.000391
ORF1ab/nsp4173T173IaCcaTc6262AY.1030.000385
ORF1ab/nsp4173T173IaCcaTc6262B.1.5250.007016
ORF1ab/nsp4173T173IaCcaTc4949B.1.617.20.000185
ORF1ab/nsp4173T173IaCcaTc4343B.1.1.390.021916
ORF1ab/nsp4173T173IaCcaTc3333B.1.1.70.00003
ORF1ab/nsp4173T173IaCcaTc2626B.10.000238
ORF1ab/nsp4173T173IaCcaTc2424AY.430.000106
ORF1ab/nsp4173T173IaCcaTc2121B.1.2430.001461
ORF1ab/nsp4173T173IaCcaTc1919AY.30.000189
ORF1ab/nsp4173T173IaCcaTc1515AY.50.00031
ORF1ab/nsp4173T173IaCcaTc1414B.1.10.000254
ORF1ab/nsp4173T173IaCcaTc1212AY.330.000801
ORF1ab/nsp4173T173IaCcaTc1010AY.290.000158
ORF1ab/nsp4173T173IaCcaTc1010AY.360.001482
ORF1ab/nsp4173T173IaCcaTc1010B.1.20.000088
ORF1ab/nsp4173T173IaCcaTc99AY.1020.000239
ORF1ab/nsp4173T173IaCcaTc99AY.850.003845
ORF1ab/nsp4173T173IaCcaTc88AY.4.50.00086
ORF1ab/nsp4173T173IaCcaTc77B.1.3110.001922
ORF1ab/nsp4173T173IaCcaTc66AY.1190.000212
ORF1ab/nsp4173T173IaCcaTc66AY.200.000233
ORF1ab/nsp4173T173IaCcaTc66AY.390.000148
ORF1ab/nsp4173T173IaCcaTc66B0.000767
ORF1ab/nsp4173T173IaCcaTc55AY.1100.000563
ORF1ab/nsp4173T173IaCcaTc55AY.1200.000186
ORF1ab/nsp4173T173IaCcaTc55AY.39.10.000198
ORF1ab/nsp4173T173IaCcaTc44AY.1060.00134
ORF1ab/nsp4173T173IaCcaTc44AY.3.10.000341
ORF1ab/nsp4173T173IaCcaTc44AY.470.000124
ORF1ab/nsp4173T173IaCcaTc44B.1.1.3170.001647
ORF1ab/nsp4173T173IaCcaTc33AT.10.015385
ORF1ab/nsp4173T173IaCcaTc33AY.1000.000138
ORF1ab/nsp4173T173IaCcaTc33AY.340.000291
ORF1ab/nsp4173T173IaCcaTc33AY.4.40.001227
ORF1ab/nsp4173T173IaCcaTc33AY.690.00056
ORF1ab/nsp4173T173IaCcaTc33AY.980.000237
ORF1ab/nsp4173T173IaCcaTc33B.1.1770.00004
ORF1ab/nsp4173T173IaCcaTc33B.1.3690.000856
ORF1ab/nsp4173T173IaCcaTc220.111111
ORF1ab/nsp4173T173IaCcaTc22AY.230.000139
ORF1ab/nsp4173T173IaCcaTc22AY.260.000057
ORF1ab/nsp4173T173IaCcaTc22AY.4.20.000043
ORF1ab/nsp4173T173IaCcaTc22AY.420.00008
ORF1ab/nsp4173T173IaCcaTc22AY.860.00166
ORF1ab/nsp4173T173IaCcaTc22AY.9.10.000167
ORF1ab/nsp4173T173IaCcaTc22B.1.2580.000133
ORF1ab/nsp4173T173IaCcaTc22B.1.3510.000059
ORF1ab/nsp4173T173IaCcaTc22B.1.5750.000607
ORF1ab/nsp4173T173IaCcaTc22B.1.5760.001813
ORF1ab/nsp4173T173IaCcaTc22B.1.5960.000174
ORF1ab/nsp4173T173IaCcaTc22B.1.617.10.000258
ORF1ab/nsp4173T173IaCcaTc22B.1.6210.000177
ORF1ab/nsp4173T173IaCcaTc22D.20.00015
ORF1ab/nsp4173T173IaCcaTc22P.40.007605
ORF1ab/nsp4173T173IaCcaTc22Q.80.00033
ORF1ab/nsp4173T173IaCcaTc11AY.100.00053
ORF1ab/nsp4173T173IaCcaTc11AY.1010.00049
ORF1ab/nsp4173T173IaCcaTc11AY.1070.000466
ORF1ab/nsp4173T173IaCcaTc11AY.1090.00074
ORF1ab/nsp4173T173IaCcaTc11AY.1170.000085
ORF1ab/nsp4173T173IaCcaTc11AY.120.10.000321
ORF1ab/nsp4173T173IaCcaTc11AY.120.20.001285
ORF1ab/nsp4173T173IaCcaTc11AY.270.000065
ORF1ab/nsp4173T173IaCcaTc11AY.4.2.10.000149
ORF1ab/nsp4173T173IaCcaTc11AY.450.000122
ORF1ab/nsp4173T173IaCcaTc11AY.46.50.000198
ORF1ab/nsp4173T173IaCcaTc11AY.480.000465
ORF1ab/nsp4173T173IaCcaTc11AY.5.30.000337
ORF1ab/nsp4173T173IaCcaTc11AY.650.000533
ORF1ab/nsp4173T173IaCcaTc11AY.790.001211
ORF1ab/nsp4173T173IaCcaTc11AY.820.001357
ORF1ab/nsp4173T173IaCcaTc11AY.840.000437
ORF1ab/nsp4173T173IaCcaTc11AY.9.20.000037
ORF1ab/nsp4173T173IaCcaTc11AY.940.000443
ORF1ab/nsp4173T173IaCcaTc11AY.98.10.000048
ORF1ab/nsp4173T173IaCcaTc11B.1.1.2220.000204
ORF1ab/nsp4173T173IaCcaTc11B.1.1.280.000311
ORF1ab/nsp4173T173IaCcaTc11B.1.1.2840.000107
ORF1ab/nsp4173T173IaCcaTc11B.1.1.3060.000438
ORF1ab/nsp4173T173IaCcaTc11B.1.1.370.000193
ORF1ab/nsp4173T173IaCcaTc11B.1.177.690.001484
ORF1ab/nsp4173T173IaCcaTc11B.1.177.80.000752
ORF1ab/nsp4173T173IaCcaTc11B.1.360.000146
ORF1ab/nsp4173T173IaCcaTc11B.1.4080.00369
ORF1ab/nsp4173T173IaCcaTc11B.1.438.10.000107
ORF1ab/nsp4173T173IaCcaTc11B.1.466.20.000391
ORF1ab/nsp4173T173IaCcaTc11B.1.4700.001404
ORF1ab/nsp4173T173IaCcaTc11B.1.5260.000024
ORF1ab/nsp4173T173IaCcaTc11B.1.5880.00091
ORF1ab/nsp4173T173IaCcaTc11B.1.6250.002353
ORF1ab/nsp4173T173IaCcaTc11B.1.6280.000352
ORF1ab/nsp4173T173IaCcaTc11L.30.003546
ORF1ab/nsp4173T173IaCcaTc11P.1.170.000162
ORF1ab/nsp4173T173IaCcaTc11Q.40.000455