CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T14T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp414T14TT2777TsynacAacG1201040.8666678594-8596
ORF1ab/nsp414T14TT2777TsynacAacT120110.09166678594-8596
ORF1ab/nsp414T14TT2777TsynacAacC12050.04166678594-8596

Details of the mutation T14T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp414T14TacAacG104120All0.00002
ORF1ab/nsp414T14TacAacT11120All0.000002
ORF1ab/nsp414T14TacAacC5120All0.000001
ORF1ab/nsp414T14TacAacG4546B.1.1.70.00004
ORF1ab/nsp414T14TacAacT146B.1.1.70.000001
ORF1ab/nsp414T14TacAacG1313AY.440.000079
ORF1ab/nsp414T14TacAacG77B.1.20.000062
ORF1ab/nsp414T14TacAacG46AY.230.000279
ORF1ab/nsp414T14TacAacT26AY.230.000139
ORF1ab/nsp414T14TacAacG35B.1.617.20.000011
ORF1ab/nsp414T14TacAacC25B.1.617.20.000008
ORF1ab/nsp414T14TacAacG44AY.40.000006
ORF1ab/nsp414T14TacAacG34B.10.000027
ORF1ab/nsp414T14TacAacT14B.10.000009
ORF1ab/nsp414T14TacAacT230.111111
ORF1ab/nsp414T14TacAacC130.055556
ORF1ab/nsp414T14TacAacG33B.1.1.1580.036585
ORF1ab/nsp414T14TacAacG23B.1.1.390.001019
ORF1ab/nsp414T14TacAacT13B.1.1.390.00051
ORF1ab/nsp414T14TacAacG33P.10.000047
ORF1ab/nsp414T14TacAacG22B.1.5260.000047
ORF1ab/nsp414T14TacAacG22B.1.6210.000177
ORF1ab/nsp414T14TacAacG11A.20.000662
ORF1ab/nsp414T14TacAacT11AY.1160.000287
ORF1ab/nsp414T14TacAacT11AY.1190.000035
ORF1ab/nsp414T14TacAacG11AY.140.000088
ORF1ab/nsp414T14TacAacG11AY.200.000039
ORF1ab/nsp414T14TacAacG11AY.23.10.000417
ORF1ab/nsp414T14TacAacG11AY.250.000006
ORF1ab/nsp414T14TacAacG11AY.30.00001
ORF1ab/nsp414T14TacAacC11AY.850.000427
ORF1ab/nsp414T14TacAacG11AY.90.000068
ORF1ab/nsp414T14TacAacG11B.1.1.1940.00495
ORF1ab/nsp414T14TacAacC11B.1.1570.002985
ORF1ab/nsp414T14TacAacG11B.1.177.70.000165
ORF1ab/nsp414T14TacAacT11B.1.2210.000071
ORF1ab/nsp414T14TacAacT11B.1.2400.000216
ORF1ab/nsp414T14TacAacG11B.1.258.170.000104
ORF1ab/nsp414T14TacAacG11B.1.4090.000781
ORF1ab/nsp414T14TacAacG11B.1.6370.000073
ORF1ab/nsp414T14TacAacG11B.400.000364