CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T14I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp414T14IT2777InonsynaCaaTa219321890.9981768594-8596
ORF1ab/nsp414T14IT2777InonsynaCAaTT219330.001367998594-8596
ORF1ab/nsp414T14IT2777InonsynaCAaTC219310.0004559968594-8596

Details of the mutation T14I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp414T14IaCaaTa21892193All0.000419
ORF1ab/nsp414T14IaCAaTT32193All0.000001
ORF1ab/nsp414T14IaCAaTC12193All0
ORF1ab/nsp414T14IaCaaTa526526B.1.20.004632
ORF1ab/nsp414T14IaCaaTa520520AY.40.000809
ORF1ab/nsp414T14IaCaaTa402402B.1.1.3740.954869
ORF1ab/nsp414T14IaCaaTa206206B.1.1.70.000184
ORF1ab/nsp414T14IaCaaTa127127B.1.617.20.000478
ORF1ab/nsp414T14IaCaaTa4242AY.1030.000261
ORF1ab/nsp414T14IaCaaTa2525AY.330.001669
ORF1ab/nsp414T14IaCaaTa1818B.1.36.360.010837
ORF1ab/nsp414T14IaCaaTa1717B.1.10.000308
ORF1ab/nsp414T14IaCaaTa1516B.10.000137
ORF1ab/nsp414T14IaCAaTT116B.10.000009
ORF1ab/nsp414T14IaCaaTa1515B.1.1770.000198
ORF1ab/nsp414T14IaCaaTa1212B.1.3500.035191
ORF1ab/nsp414T14IaCaaTa1111AY.250.000066
ORF1ab/nsp414T14IaCaaTa1010B.1.258.170.00104
ORF1ab/nsp414T14IaCaaTa89AY.440.000049
ORF1ab/nsp414T14IaCAaTC19AY.440.000006
ORF1ab/nsp414T14IaCaaTa99B.1.1.120.067164
ORF1ab/nsp414T14IaCaaTa89B.1.2210.000568
ORF1ab/nsp414T14IaCAaTT19B.1.2210.000071
ORF1ab/nsp414T14IaCaaTa99B.1.3510.000268
ORF1ab/nsp414T14IaCaaTa99B.1.4290.000212
ORF1ab/nsp414T14IaCaaTa88AY.30.00008
ORF1ab/nsp414T14IaCaaTa66AY.200.000233
ORF1ab/nsp414T14IaCaaTa66B.1.2580.000399
ORF1ab/nsp414T14IaCaaTa66B.1.3710.006734
ORF1ab/nsp414T14IaCaaTa66B.1.5260.000141
ORF1ab/nsp414T14IaCaaTa55AY.430.000022
ORF1ab/nsp414T14IaCaaTa55AY.46.60.000361
ORF1ab/nsp414T14IaCaaTa55B.1.1.1920.011547
ORF1ab/nsp414T14IaCaaTa55B.1.1.2140.000277
ORF1ab/nsp414T14IaCaaTa55B.1.1600.000156
ORF1ab/nsp414T14IaCaaTa55B.1.6210.000443
ORF1ab/nsp414T14IaCaaTa44AY.1020.000106
ORF1ab/nsp414T14IaCaaTa44AY.290.000063
ORF1ab/nsp414T14IaCaaTa44AY.390.000099
ORF1ab/nsp414T14IaCaaTa44B.1.1.4620.034483
ORF1ab/nsp414T14IaCaaTa44P.10.000063
ORF1ab/nsp414T14IaCaaTa44Q.10.000505
ORF1ab/nsp414T14IaCaaTa33A.50.005769
ORF1ab/nsp414T14IaCaaTa33AY.260.000085
ORF1ab/nsp414T14IaCaaTa33AY.340.000291
ORF1ab/nsp414T14IaCaaTa33AY.650.001599
ORF1ab/nsp414T14IaCaaTa33AY.850.001282
ORF1ab/nsp414T14IaCaaTa33B.1.1.1340.034091
ORF1ab/nsp414T14IaCaaTa33B.1.1.390.001529
ORF1ab/nsp414T14IaCaaTa33B.1.6310.010101
ORF1ab/nsp414T14IaCaaTa33Q.80.000495
ORF1ab/nsp414T14IaCAaTT120.055556
ORF1ab/nsp414T14IaCaaTa120.055556
ORF1ab/nsp414T14IaCaaTa22A.2.50.000998
ORF1ab/nsp414T14IaCaaTa22AY.4.20.000043
ORF1ab/nsp414T14IaCaaTa22AY.470.000062
ORF1ab/nsp414T14IaCaaTa22AY.980.000158
ORF1ab/nsp414T14IaCaaTa22B.1.1.3180.000604
ORF1ab/nsp414T14IaCaaTa22B.1.1.3980.006452
ORF1ab/nsp414T14IaCaaTa22B.1.1.5190.000079
ORF1ab/nsp414T14IaCaaTa22B.1.1260.002551
ORF1ab/nsp414T14IaCaaTa22B.1.1570.00597
ORF1ab/nsp414T14IaCaaTa22B.1.177.730.001133
ORF1ab/nsp414T14IaCaaTa22B.1.177.810.000379
ORF1ab/nsp414T14IaCaaTa22B.1.2360.004107
ORF1ab/nsp414T14IaCaaTa22B.1.3990.003868
ORF1ab/nsp414T14IaCaaTa22B.1.438.10.000215
ORF1ab/nsp414T14IaCaaTa22B.1.5160.003914
ORF1ab/nsp414T14IaCaaTa22B.1.5960.000174
ORF1ab/nsp414T14IaCaaTa22P.20.000373
ORF1ab/nsp414T14IaCaaTa11AD.20.000219
ORF1ab/nsp414T14IaCaaTa11AY.10.000396
ORF1ab/nsp414T14IaCaaTa11AY.1000.000046
ORF1ab/nsp414T14IaCaaTa11AY.1090.00074
ORF1ab/nsp414T14IaCaaTa11AY.1190.000035
ORF1ab/nsp414T14IaCaaTa11AY.130.000161
ORF1ab/nsp414T14IaCaaTa11AY.16.10.00047
ORF1ab/nsp414T14IaCaaTa11AY.230.00007
ORF1ab/nsp414T14IaCaaTa11AY.270.000065
ORF1ab/nsp414T14IaCaaTa11AY.3.10.000085
ORF1ab/nsp414T14IaCaaTa11AY.4.50.000107
ORF1ab/nsp414T14IaCaaTa11AY.400.000964
ORF1ab/nsp414T14IaCaaTa11AY.410.000294
ORF1ab/nsp414T14IaCaaTa11AY.420.00004
ORF1ab/nsp414T14IaCaaTa11AY.450.000122
ORF1ab/nsp414T14IaCaaTa11AY.610.000105
ORF1ab/nsp414T14IaCaaTa11AY.790.001211
ORF1ab/nsp414T14IaCaaTa11AY.90.000068
ORF1ab/nsp414T14IaCaaTa11AY.9.10.000084
ORF1ab/nsp414T14IaCaaTa11AY.91.10.004065
ORF1ab/nsp414T14IaCaaTa11AY.98.10.000048
ORF1ab/nsp414T14IaCaaTa11B.1.1.10.000327
ORF1ab/nsp414T14IaCaaTa11B.1.1.2000.007463
ORF1ab/nsp414T14IaCaaTa11B.1.1.330.000421
ORF1ab/nsp414T14IaCaaTa11B.1.1.3630.005988
ORF1ab/nsp414T14IaCaaTa11B.1.1.370.000193
ORF1ab/nsp414T14IaCaaTa11B.1.1.3970.002252
ORF1ab/nsp414T14IaCaaTa11B.1.1.4370.010417
ORF1ab/nsp414T14IaCaaTa11B.1.1.560.017857
ORF1ab/nsp414T14IaCaaTa11B.1.160.300.002976
ORF1ab/nsp414T14IaCaaTa11B.1.177.320.00135
ORF1ab/nsp414T14IaCaaTa11B.1.177.530.002392
ORF1ab/nsp414T14IaCaaTa11B.1.1920.009259
ORF1ab/nsp414T14IaCaaTa11B.1.214.20.0006
ORF1ab/nsp414T14IaCaaTa11B.1.221.30.000833
ORF1ab/nsp414T14IaCaaTa11B.1.2340.000132
ORF1ab/nsp414T14IaCaaTa11B.1.3110.000275
ORF1ab/nsp414T14IaCaaTa11B.1.360.000146
ORF1ab/nsp414T14IaCaaTa11B.1.36.100.004785
ORF1ab/nsp414T14IaCaaTa11B.1.36.80.001
ORF1ab/nsp414T14IaCaaTa11B.1.3610.001289
ORF1ab/nsp414T14IaCaaTa11B.1.3690.000285
ORF1ab/nsp414T14IaCaaTa11B.1.5560.007519
ORF1ab/nsp414T14IaCaaTa11B.1.5620.018519
ORF1ab/nsp414T14IaCaaTa11B.1.5640.000426
ORF1ab/nsp414T14IaCaaTa11B.1.5950.000261
ORF1ab/nsp414T14IaCaaTa11B.1.5970.00463
ORF1ab/nsp414T14IaCaaTa11B.1.617.10.000129
ORF1ab/nsp414T14IaCaaTa11B.400.000364
ORF1ab/nsp414T14IaCaaTa11C.370.000116
ORF1ab/nsp414T14IaCaaTa11P.1.150.000232
ORF1ab/nsp414T14IaCaaTa11Q.30.000145