CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T143del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4143T143del1T2906del1delacTac-630.58981-8983
ORF1ab/nsp4143T143del1T2906del1delAct-ct620.3333338981-8983
ORF1ab/nsp4143T143del1T2906del1delaCta-t610.1666678981-8983

Details of the mutation T143del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4143T143del1acTac-36All0.000001
ORF1ab/nsp4143T143del1Act-ct26All0
ORF1ab/nsp4143T143del1aCta-t16All0
ORF1ab/nsp4143T143del1Act-ct24B.1.1.70.000002
ORF1ab/nsp4143T143del1acTac-24B.1.1.70.000002
ORF1ab/nsp4143T143del1aCta-t11B.1.2470.014925
ORF1ab/nsp4143T143del1acTac-11B.1.617.20.000004