CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = T143S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4143T143ST2906SnonsynaCtaGt1470.58981-8983
ORF1ab/nsp4143T143ST2906SnonsynActTct1470.58981-8983

Details of the mutation T143S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4143T143SaCtaGt714All0.000001
ORF1ab/nsp4143T143SActTct714All0.000001
ORF1ab/nsp4143T143SaCtaGt33B.1.617.20.000011
ORF1ab/nsp4143T143SActTct12B.1.1.70.000001
ORF1ab/nsp4143T143SaCtaGt12B.1.1.70.000001
ORF1ab/nsp4143T143SActTct11AY.430.000004
ORF1ab/nsp4143T143SActTct11AY.440.000006
ORF1ab/nsp4143T143SaCtaGt11B.10.000009
ORF1ab/nsp4143T143SActTct11B.1.10.000018
ORF1ab/nsp4143T143SActTct11B.1.1.3540.004386
ORF1ab/nsp4143T143SaCtaGt11B.1.1.370.000193
ORF1ab/nsp4143T143SActTct11B.1.2360.002053
ORF1ab/nsp4143T143SaCtaGt11B.1.5950.000261
ORF1ab/nsp4143T143SActTct11B.1.617.10.000129