CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S481L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4481S481LS3244LnonsyntCatTa607960720.9988489995-9997
ORF1ab/nsp4481S481LS3244LnonsyntCAtTG607950.0008225049995-9997
ORF1ab/nsp4481S481LS3244LnonsynTCaCTa607910.0001645019995-9997
ORF1ab/nsp4481S481LS3244LnonsynTCACTC607910.0001645019995-9997

Details of the mutation S481L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4481S481LtCatTa60726079All0.001161
ORF1ab/nsp4481S481LtCAtTG56079All0.000001
ORF1ab/nsp4481S481LTCACTC16079All0
ORF1ab/nsp4481S481LTCaCTa16079All0
ORF1ab/nsp4481S481LtCatTa14701471B.1.1.70.001316
ORF1ab/nsp4481S481LtCAtTG11471B.1.1.70.000001
ORF1ab/nsp4481S481LtCatTa380380B.1.617.20.001431
ORF1ab/nsp4481S481LtCatTa370370AY.40.000576
ORF1ab/nsp4481S481LtCatTa324324B.1.1.3681
ORF1ab/nsp4481S481LtCatTa306306AY.430.001356
ORF1ab/nsp4481S481LtCatTa293293B.1.20.00258
ORF1ab/nsp4481S481LtCatTa211211B.1.2430.014682
ORF1ab/nsp4481S481LtCatTa185185AY.4.50.019886
ORF1ab/nsp4481S481LtCatTa180180D.20.013507
ORF1ab/nsp4481S481LtCatTa148148B.1.3510.0044
ORF1ab/nsp4481S481LtCatTa140141B.10.001282
ORF1ab/nsp4481S481LtCAtTG1141B.10.000009
ORF1ab/nsp4481S481LtCatTa131131AY.1030.000813
ORF1ab/nsp4481S481LtCatTa101102P.10.001591
ORF1ab/nsp4481S481LtCAtTG1102P.10.000016
ORF1ab/nsp4481S481LtCatTa100100B.1.10.001814
ORF1ab/nsp4481S481LtCatTa9898AY.440.000597
ORF1ab/nsp4481S481LtCatTa8080B.1.1.1530.087623
ORF1ab/nsp4481S481LtCatTa8080B.1.5090.069264
ORF1ab/nsp4481S481LtCatTa7979AY.30.000786
ORF1ab/nsp4481S481LtCatTa6666B.1.1770.000869
ORF1ab/nsp4481S481LtCatTa6262AY.200.00241
ORF1ab/nsp4481S481LtCatTa6060AY.250.000361
ORF1ab/nsp4481S481LtCatTa5252AY.880.045977
ORF1ab/nsp4481S481LtCatTa4141AY.120.10.013162
ORF1ab/nsp4481S481LtCatTa4040AY.660.042781
ORF1ab/nsp4481S481LtCatTa3535B.1.1.1890.05295
ORF1ab/nsp4481S481LtCatTa3333AY.1190.001165
ORF1ab/nsp4481S481LtCatTa3333C.260.242647
ORF1ab/nsp4481S481LtCatTa3232AY.290.000505
ORF1ab/nsp4481S481LtCatTa3131AY.980.002449
ORF1ab/nsp4481S481LtCatTa2929AY.1000.001334
ORF1ab/nsp4481S481LtCatTa2929B.1.5960.002527
ORF1ab/nsp4481S481LtCatTa2828B.1.4290.000659
ORF1ab/nsp4481S481LtCatTa2727B.1.1.2140.001497
ORF1ab/nsp4481S481LtCatTa2626B.1.3690.007416
ORF1ab/nsp4481S481LtCatTa2424Q.30.003481
ORF1ab/nsp4481S481LtCatTa2121AY.50.000434
ORF1ab/nsp4481S481LtCatTa2020AY.1020.00053
ORF1ab/nsp4481S481LtCatTa2020AY.1180.001253
ORF1ab/nsp4481S481LtCatTa1919B.1.4000.008151
ORF1ab/nsp4481S481LtCatTa1919B.1.5260.000447
ORF1ab/nsp4481S481LtCatTa1919B.1.617.10.00245
ORF1ab/nsp4481S481LtCatTa1919P.1.140.000908
ORF1ab/nsp4481S481LtCatTa1919Q.40.00864
ORF1ab/nsp4481S481LtCatTa1616B.1.2210.001137
ORF1ab/nsp4481S481LtCatTa1616B.1.4040.020833
ORF1ab/nsp4481S481LtCatTa1515AY.320.007987
ORF1ab/nsp4481S481LtCatTa1414AY.1210.001894
ORF1ab/nsp4481S481LtCatTa1414B.1.1.330.005892
ORF1ab/nsp4481S481LtCatTa1212AY.390.000297
ORF1ab/nsp4481S481LtCatTa1212B.1.258.170.001248
ORF1ab/nsp4481S481LtCatTa1111B.1.1.5190.000437
ORF1ab/nsp4481S481LtCatTa1111B.1.1600.000343
ORF1ab/nsp4481S481LtCatTa1111Q.80.001814
ORF1ab/nsp4481S481LtCatTa1010AE.80.00489
ORF1ab/nsp4481S481LtCatTa1010B.1.1.1680.263158
ORF1ab/nsp4481S481LtCatTa1010B.1.2580.000665
ORF1ab/nsp4481S481LtCatTa99AY.46.60.00065
ORF1ab/nsp4481S481LtCatTa99B0.00115
ORF1ab/nsp4481S481LtCatTa99B.1.2320.004836
ORF1ab/nsp4481S481LtCatTa88AY.330.000534
ORF1ab/nsp4481S481LtCatTa88AY.4.20.000174
ORF1ab/nsp4481S481LtCatTa88B.1.4270.000404
ORF1ab/nsp4481S481LtCatTa77AY.410.002058
ORF1ab/nsp4481S481LtCatTa77AY.98.10.000339
ORF1ab/nsp4481S481LtCatTa77B.1.351.50.004197
ORF1ab/nsp4481S481LtCatTa66AY.1070.002796
ORF1ab/nsp4481S481LtCatTa66AY.230.000418
ORF1ab/nsp4481S481LtCatTa66AY.420.000241
ORF1ab/nsp4481S481LtCatTa66AY.460.000624
ORF1ab/nsp4481S481LtCatTa66AY.60.000247
ORF1ab/nsp4481S481LtCatTa66AY.750.000336
ORF1ab/nsp4481S481LtCatTa66B.1.1.4860.009464
ORF1ab/nsp4481S481LtCatTa66B.1.177.40.001266
ORF1ab/nsp4481S481LtCatTa66C.370.000696
ORF1ab/nsp4481S481LtCatTa55AY.1170.000423
ORF1ab/nsp4481S481LtCatTa55AY.340.000485
ORF1ab/nsp4481S481LtCatTa55B.1.1.1760.002197
ORF1ab/nsp4481S481LtCatTa55B.1.1.2070.00591
ORF1ab/nsp4481S481LtCatTa55B.1.1.2220.00102
ORF1ab/nsp4481S481LtCatTa55B.1.1.4340.001743
ORF1ab/nsp4481S481LtCatTa55B.1.177.350.003455
ORF1ab/nsp4481S481LtCatTa55B.1.3550.055556
ORF1ab/nsp4481S481LtCatTa55B.1.36.250.011038
ORF1ab/nsp4481S481LtCatTa35P.1.120.001452
ORF1ab/nsp4481S481LtCAtTG25P.1.120.000968
ORF1ab/nsp4481S481LtCatTa44AY.1160.001147
ORF1ab/nsp4481S481LtCatTa44AY.260.000113
ORF1ab/nsp4481S481LtCatTa44B.1.1390.002933
ORF1ab/nsp4481S481LtCatTa44B.1.177.820.001909
ORF1ab/nsp4481S481LtCatTa44B.1.4780.047059
ORF1ab/nsp4481S481LtCatTa44P.20.000747
ORF1ab/nsp4481S481LTCaCTa130.055556
ORF1ab/nsp4481S481LTCACTC130.055556
ORF1ab/nsp4481S481LtCatTa130.055556
ORF1ab/nsp4481S481LtCatTa33A.20.001985
ORF1ab/nsp4481S481LtCatTa33AY.360.000445
ORF1ab/nsp4481S481LtCatTa33AY.39.10.000119
ORF1ab/nsp4481S481LtCatTa33AY.9.20.00011
ORF1ab/nsp4481S481LtCatTa33B.1.1.280.000934
ORF1ab/nsp4481S481LtCatTa33B.1.1.3170.001235
ORF1ab/nsp4481S481LtCatTa33B.1.1.3180.000905
ORF1ab/nsp4481S481LtCatTa33B.1.177.120.000455
ORF1ab/nsp4481S481LtCatTa33B.1.177.180.00348
ORF1ab/nsp4481S481LtCatTa33B.1.177.380.03125
ORF1ab/nsp4481S481LtCatTa33B.1.177.460.002755
ORF1ab/nsp4481S481LtCatTa33B.1.3150.018182
ORF1ab/nsp4481S481LtCatTa33B.1.360.000438
ORF1ab/nsp4481S481LtCatTa33B.1.4970.000944
ORF1ab/nsp4481S481LtCatTa33B.1.6090.001438
ORF1ab/nsp4481S481LtCatTa22A.2.5.10.009615
ORF1ab/nsp4481S481LtCatTa22AE.40.086957
ORF1ab/nsp4481S481LtCatTa22AY.1050.001286
ORF1ab/nsp4481S481LtCatTa22AY.1060.00067
ORF1ab/nsp4481S481LtCatTa22AY.120.000632
ORF1ab/nsp4481S481LtCatTa22AY.130.000322
ORF1ab/nsp4481S481LtCatTa22AY.3.10.000171
ORF1ab/nsp4481S481LtCatTa22AY.34.10.00102
ORF1ab/nsp4481S481LtCatTa22AY.4.10.001475
ORF1ab/nsp4481S481LtCatTa22AY.450.000243
ORF1ab/nsp4481S481LtCatTa22AY.46.40.000329
ORF1ab/nsp4481S481LtCatTa22AY.470.000062
ORF1ab/nsp4481S481LtCatTa22AY.640.00119
ORF1ab/nsp4481S481LtCatTa22AY.70.000392
ORF1ab/nsp4481S481LtCatTa22AY.740.000231
ORF1ab/nsp4481S481LtCatTa22AY.850.000854
ORF1ab/nsp4481S481LtCatTa22AY.900.001369
ORF1ab/nsp4481S481LtCatTa22AY.99.20.000184
ORF1ab/nsp4481S481LtCatTa22B.1.1.2540.022472
ORF1ab/nsp4481S481LtCatTa22B.1.1.2840.000215
ORF1ab/nsp4481S481LtCatTa22B.1.1.3690.000892
ORF1ab/nsp4481S481LtCatTa22B.1.1.3720.001377
ORF1ab/nsp4481S481LtCatTa22B.1.1.4320.002532
ORF1ab/nsp4481S481LtCatTa22B.1.1260.002551
ORF1ab/nsp4481S481LtCatTa22B.1.177.600.000437
ORF1ab/nsp4481S481LtCatTa22B.1.177.620.002384
ORF1ab/nsp4481S481LtCatTa22B.1.177.810.000379
ORF1ab/nsp4481S481LtCatTa22B.1.1990.008264
ORF1ab/nsp4481S481LtCatTa22B.1.2140.007326
ORF1ab/nsp4481S481LtCatTa22B.1.2340.000264
ORF1ab/nsp4481S481LtCatTa22B.1.258.110.000793
ORF1ab/nsp4481S481LtCatTa22B.1.258.70.003824
ORF1ab/nsp4481S481LtCatTa22B.1.30.005236
ORF1ab/nsp4481S481LtCatTa22B.1.36.390.004435
ORF1ab/nsp4481S481LtCatTa22B.1.3620.003082
ORF1ab/nsp4481S481LtCatTa22B.1.4220.001625
ORF1ab/nsp4481S481LtCatTa22B.1.4620.014493
ORF1ab/nsp4481S481LtCatTa22B.1.5160.003914
ORF1ab/nsp4481S481LtCatTa22B.1.5640.000852
ORF1ab/nsp4481S481LtCatTa22B.1.5810.018868
ORF1ab/nsp4481S481LtCatTa22B.1.5880.00182
ORF1ab/nsp4481S481LtCatTa22B.1.5950.000522
ORF1ab/nsp4481S481LtCatTa22B.1.621.10.001012
ORF1ab/nsp4481S481LtCatTa22B.1.6370.000146
ORF1ab/nsp4481S481LtCatTa22B.6.60.001778
ORF1ab/nsp4481S481LtCatTa22P.1.150.000465
ORF1ab/nsp4481S481LtCatTa22P.1.20.002312
ORF1ab/nsp4481S481LtCatTa22Q.10.000253
ORF1ab/nsp4481S481LtCatTa11A.10.000282
ORF1ab/nsp4481S481LtCatTa11A.2.20.001689
ORF1ab/nsp4481S481LtCatTa11A.2.50.000499
ORF1ab/nsp4481S481LtCatTa11A.2.5.20.001572
ORF1ab/nsp4481S481LtCatTa11AY.1010.00049
ORF1ab/nsp4481S481LtCatTa11AY.1080.001103
ORF1ab/nsp4481S481LtCatTa11AY.1090.00074
ORF1ab/nsp4481S481LtCatTa11AY.1130.000142
ORF1ab/nsp4481S481LtCatTa11AY.1200.000037
ORF1ab/nsp4481S481LtCatTa11AY.120.20.001285
ORF1ab/nsp4481S481LtCatTa11AY.140.000088
ORF1ab/nsp4481S481LtCatTa11AY.270.000065
ORF1ab/nsp4481S481LtCatTa11AY.29.10.000221
ORF1ab/nsp4481S481LtCatTa11AY.370.000316
ORF1ab/nsp4481S481LtCatTa11AY.4.30.000842
ORF1ab/nsp4481S481LtCatTa11AY.4.40.000409
ORF1ab/nsp4481S481LtCatTa11AY.46.20.000635
ORF1ab/nsp4481S481LtCatTa11AY.5.30.000337
ORF1ab/nsp4481S481LtCatTa11AY.600.000938
ORF1ab/nsp4481S481LtCatTa11AY.650.000533
ORF1ab/nsp4481S481LtCatTa11AY.7.10.000113
ORF1ab/nsp4481S481LtCatTa11AY.7.20.000559
ORF1ab/nsp4481S481LtCatTa11AY.790.001211
ORF1ab/nsp4481S481LtCatTa11AY.90.000068
ORF1ab/nsp4481S481LtCatTa11AY.910.00073
ORF1ab/nsp4481S481LtCatTa11AY.950.000761
ORF1ab/nsp4481S481LtCatTa11B.1.1.10.000327
ORF1ab/nsp4481S481LtCatTa11B.1.1.1700.001247
ORF1ab/nsp4481S481LtCatTa11B.1.1.1740.003378
ORF1ab/nsp4481S481LtCatTa11B.1.1.1980.001468
ORF1ab/nsp4481S481LtCatTa11B.1.1.2260.005814
ORF1ab/nsp4481S481LtCatTa11B.1.1.2290.005747
ORF1ab/nsp4481S481LtCatTa11B.1.1.2690.001353
ORF1ab/nsp4481S481LtCatTa11B.1.1.3020.002075
ORF1ab/nsp4481S481LtCatTa11B.1.1.3050.003861
ORF1ab/nsp4481S481LtCatTa11B.1.1.3060.000438
ORF1ab/nsp4481S481LtCatTa11B.1.1.3160.000925
ORF1ab/nsp4481S481LtCatTa11B.1.1.370.000193
ORF1ab/nsp4481S481LtCatTa11B.1.1.3980.003226
ORF1ab/nsp4481S481LtCatTa11B.1.1.4020.011111
ORF1ab/nsp4481S481LtCatTa11B.1.1.4090.002833
ORF1ab/nsp4481S481LtCatTa11B.1.1.410.006329
ORF1ab/nsp4481S481LtCatTa11B.1.1.500.000679
ORF1ab/nsp4481S481LtCatTa11B.1.1.5210.005348
ORF1ab/nsp4481S481LtCatTa11B.1.1.630.000386
ORF1ab/nsp4481S481LtCatTa11B.1.1110.001175
ORF1ab/nsp4481S481LtCatTa11B.1.120.008
ORF1ab/nsp4481S481LtCatTa11B.1.1430.021277
ORF1ab/nsp4481S481LtCatTa11B.1.177.100.000878
ORF1ab/nsp4481S481LtCatTa11B.1.177.210.000076
ORF1ab/nsp4481S481LtCatTa11B.1.177.430.001477
ORF1ab/nsp4481S481LtCatTa11B.1.177.830.001481
ORF1ab/nsp4481S481LtCatTa11B.1.177.860.000183
ORF1ab/nsp4481S481LtCatTa11B.1.177.870.000728
ORF1ab/nsp4481S481LtCatTa11B.1.1890.004292
ORF1ab/nsp4481S481LtCatTa11B.1.220.001318
ORF1ab/nsp4481S481LtCatTa11B.1.2400.000216
ORF1ab/nsp4481S481LtCatTa11B.1.258.210.007752
ORF1ab/nsp4481S481LtCatTa11B.1.3110.000275
ORF1ab/nsp4481S481LtCatTa11B.1.36.10.00114
ORF1ab/nsp4481S481LtCatTa11B.1.36.180.00042
ORF1ab/nsp4481S481LtCatTa11B.1.36.380.001642
ORF1ab/nsp4481S481LtCatTa11B.1.36.70.004
ORF1ab/nsp4481S481LtCatTa11B.1.3750.00082
ORF1ab/nsp4481S481LtCatTa11B.1.3780.006849
ORF1ab/nsp4481S481LtCatTa11B.1.3910.001127
ORF1ab/nsp4481S481LtCatTa11B.1.4240.008065
ORF1ab/nsp4481S481LtCatTa11B.1.4260.001009
ORF1ab/nsp4481S481LtCatTa11B.1.4990.00105
ORF1ab/nsp4481S481LtCatTa11B.1.5250.000113
ORF1ab/nsp4481S481LtCatTa11B.1.5270.003704
ORF1ab/nsp4481S481LtCatTa11B.1.5320.006211
ORF1ab/nsp4481S481LtCatTa11B.1.5510.00129
ORF1ab/nsp4481S481LtCatTa11B.1.5680.001111
ORF1ab/nsp4481S481LtCatTa11B.1.5750.000303
ORF1ab/nsp4481S481LtCatTa11B.1.575.10.002439
ORF1ab/nsp4481S481LtCatTa11B.1.5770.000687
ORF1ab/nsp4481S481LtCatTa11B.1.6010.030303
ORF1ab/nsp4481S481LtCatTa11B.1.617.30.002985
ORF1ab/nsp4481S481LtCatTa11B.1.6210.000089
ORF1ab/nsp4481S481LtCatTa11B.1.810.021277
ORF1ab/nsp4481S481LtCatTa11B.390.002331
ORF1ab/nsp4481S481LtCatTa11B.400.000364
ORF1ab/nsp4481S481LtCatTa11C.350.000774
ORF1ab/nsp4481S481LtCatTa11N.10.016949
ORF1ab/nsp4481S481LtCatTa11P.1.100.000269
ORF1ab/nsp4481S481LtCatTa11P.1.160.000374
ORF1ab/nsp4481S481LtCatTa11P.1.170.000162
ORF1ab/nsp4481S481LtCatTa11Q.20.000613
ORF1ab/nsp4481S481LtCatTa11R.10.00009