CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S395N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4395S395NS3158NnonsynaGtaAt1671660.9940129737-9739
ORF1ab/nsp4395S395NS3158NnonsynaGTaAC16710.005988029737-9739

Details of the mutation S395N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4395S395NaGtaAt166167All0.000032
ORF1ab/nsp4395S395NaGTaAC1167All0
ORF1ab/nsp4395S395NaGtaAt103103B.1.1.70.000092
ORF1ab/nsp4395S395NaGtaAt88AY.1030.00005
ORF1ab/nsp4395S395NaGtaAt66B.1.617.20.000023
ORF1ab/nsp4395S395NaGtaAt55B.1.3360.012195
ORF1ab/nsp4395S395NaGtaAt55B.1.5250.000566
ORF1ab/nsp4395S395NaGtaAt33B.1.1770.00004
ORF1ab/nsp4395S395NaGtaAt33B.1.4270.000151
ORF1ab/nsp4395S395NaGtaAt33P.20.00056
ORF1ab/nsp4395S395NaGtaAt22AY.290.000032
ORF1ab/nsp4395S395NaGtaAt22AY.360.000296
ORF1ab/nsp4395S395NaGtaAt22AY.40.000003
ORF1ab/nsp4395S395NaGtaAt22AY.430.000009
ORF1ab/nsp4395S395NaGtaAt22B.10.000018
ORF1ab/nsp4395S395NaGtaAt22B.1.1.460.008734
ORF1ab/nsp4395S395NaGtaAt22B.1.20.000018
ORF1ab/nsp4395S395NaGtaAt22D.20.00015
ORF1ab/nsp4395S395NaGtaAt110.055556
ORF1ab/nsp4395S395NaGtaAt11AY.1190.000035
ORF1ab/nsp4395S395NaGtaAt11AY.260.000028
ORF1ab/nsp4395S395NaGtaAt11AY.270.000065
ORF1ab/nsp4395S395NaGtaAt11AY.390.000025
ORF1ab/nsp4395S395NaGtaAt11AY.4.20.000022
ORF1ab/nsp4395S395NaGtaAt11AY.440.000006
ORF1ab/nsp4395S395NaGtaAt11B.1.1110.001175
ORF1ab/nsp4395S395NaGtaAt11B.1.221.20.004016
ORF1ab/nsp4395S395NaGtaAt11B.1.2400.000216
ORF1ab/nsp4395S395NaGtaAt11B.1.2430.00007
ORF1ab/nsp4395S395NaGtaAt11B.1.2580.000067
ORF1ab/nsp4395S395NaGtaAt11B.1.36.220.001208
ORF1ab/nsp4395S395NaGTaAC11B.400.000364
ORF1ab/nsp4395S395NaGtaAt11C.370.000116