CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S34I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp434S34IS2797InonsynTCTATA2681350.5037318654-8656
ORF1ab/nsp434S34IS2797InonsynTCtATt2681230.4589558654-8656
ORF1ab/nsp434S34IS2797InonsynTCTATC268100.03731348654-8656

Details of the mutation S34I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp434S34ITCTATA135268All0.000026
ORF1ab/nsp434S34ITCtATt123268All0.000024
ORF1ab/nsp434S34ITCTATC10268All0.000002
ORF1ab/nsp434S34ITCTATA123246B.1.1.70.00011
ORF1ab/nsp434S34ITCtATt113246B.1.1.70.000101
ORF1ab/nsp434S34ITCTATC10246B.1.1.70.000009
ORF1ab/nsp434S34ITCtATt612P.10.000095
ORF1ab/nsp434S34ITCTATA612P.10.000095
ORF1ab/nsp434S34ITCTATA12AY.250.000006
ORF1ab/nsp434S34ITCtATt12AY.250.000006
ORF1ab/nsp434S34ITCTATA22B.10.000018
ORF1ab/nsp434S34ITCTATA12B.1.10.000018
ORF1ab/nsp434S34ITCtATt12B.1.10.000018
ORF1ab/nsp434S34ITCtATt12B.1.5760.000907
ORF1ab/nsp434S34ITCTATA12B.1.5760.000907
ORF1ab/nsp434S34ITCtATt12B.1.617.20.000004
ORF1ab/nsp434S34ITCTATA12B.1.617.20.000004