CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S325S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4325S325SS3088SsyntcAtcG572756800.9917939527-9529
ORF1ab/nsp4325S325SS3088SsyntcAtcT5727380.006635249527-9529
ORF1ab/nsp4325S325SS3088SsyntcAtcC572790.00157159527-9529

Details of the mutation S325S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4325S325StcAtcG56805727All0.001086
ORF1ab/nsp4325S325StcAtcT385727All0.000007
ORF1ab/nsp4325S325StcAtcC95727All0.000002
ORF1ab/nsp4325S325StcAtcG50515051Q.30.73256
ORF1ab/nsp4325S325StcAtcG127129B.1.1770.001672
ORF1ab/nsp4325S325StcAtcT2129B.1.1770.000026
ORF1ab/nsp4325S325StcAtcG9496B.1.617.20.000354
ORF1ab/nsp4325S325StcAtcT296B.1.617.20.000008
ORF1ab/nsp4325S325StcAtcG8287B.1.1.70.000073
ORF1ab/nsp4325S325StcAtcT587B.1.1.70.000004
ORF1ab/nsp4325S325StcAtcG4545AY.200.001749
ORF1ab/nsp4325S325StcAtcG4343AY.98.10.002083
ORF1ab/nsp4325S325StcAtcG3336AY.40.000051
ORF1ab/nsp4325S325StcAtcT336AY.40.000005
ORF1ab/nsp4325S325StcAtcG3434B.1.6190.029617
ORF1ab/nsp4325S325StcAtcG2124AY.250.000126
ORF1ab/nsp4325S325StcAtcC224AY.250.000012
ORF1ab/nsp4325S325StcAtcT124AY.250.000006
ORF1ab/nsp4325S325StcAtcT1018AY.290.000158
ORF1ab/nsp4325S325StcAtcG818AY.290.000126
ORF1ab/nsp4325S325StcAtcG1116B.1.20.000097
ORF1ab/nsp4325S325StcAtcC416B.1.20.000035
ORF1ab/nsp4325S325StcAtcT116B.1.20.000009
ORF1ab/nsp4325S325StcAtcG1114AY.1020.000292
ORF1ab/nsp4325S325StcAtcT314AY.1020.00008
ORF1ab/nsp4325S325StcAtcG1212AY.430.000053
ORF1ab/nsp4325S325StcAtcG912B.10.000082
ORF1ab/nsp4325S325StcAtcT212B.10.000018
ORF1ab/nsp4325S325StcAtcC112B.10.000009
ORF1ab/nsp4325S325StcAtcG89AY.1030.00005
ORF1ab/nsp4325S325StcAtcC19AY.1030.000006
ORF1ab/nsp4325S325StcAtcG69AY.260.00017
ORF1ab/nsp4325S325StcAtcT39AY.260.000085
ORF1ab/nsp4325S325StcAtcG78B.1.10.000127
ORF1ab/nsp4325S325StcAtcT18B.1.10.000018
ORF1ab/nsp4325S325StcAtcG66P.10.000095
ORF1ab/nsp4325S325StcAtcG55AY.440.00003
ORF1ab/nsp4325S325StcAtcG33AY.30.00003
ORF1ab/nsp4325S325StcAtcG33AY.90.000203
ORF1ab/nsp4325S325StcAtcG33AY.980.000237
ORF1ab/nsp4325S325StcAtcG23B.1.1600.000062
ORF1ab/nsp4325S325StcAtcC13B.1.1600.000031
ORF1ab/nsp4325S325StcAtcG33B.1.5760.00272
ORF1ab/nsp4325S325StcAtcG23D.20.00015
ORF1ab/nsp4325S325StcAtcT13D.20.000075
ORF1ab/nsp4325S325StcAtcG33Q.80.000495
ORF1ab/nsp4325S325StcAtcG22AY.1080.002205
ORF1ab/nsp4325S325StcAtcG22AY.460.000208
ORF1ab/nsp4325S325StcAtcT12AY.50.000021
ORF1ab/nsp4325S325StcAtcG12AY.50.000021
ORF1ab/nsp4325S325StcAtcG22AY.540.000191
ORF1ab/nsp4325S325StcAtcG22AY.75.10.000361
ORF1ab/nsp4325S325StcAtcG22B.1.2060.001631
ORF1ab/nsp4325S325StcAtcG22C.10.004785
ORF1ab/nsp4325S325StcAtcG11AY.1000.000046
ORF1ab/nsp4325S325StcAtcG11AY.1060.000335
ORF1ab/nsp4325S325StcAtcG11AY.1190.000035
ORF1ab/nsp4325S325StcAtcG11AY.120.000316
ORF1ab/nsp4325S325StcAtcT11AY.140.000088
ORF1ab/nsp4325S325StcAtcG11AY.230.00007
ORF1ab/nsp4325S325StcAtcG11AY.4.20.000022
ORF1ab/nsp4325S325StcAtcG11AY.420.00004
ORF1ab/nsp4325S325StcAtcG11AY.450.000122
ORF1ab/nsp4325S325StcAtcG11AY.470.000031
ORF1ab/nsp4325S325StcAtcT11AY.60.000041
ORF1ab/nsp4325S325StcAtcG11AY.610.000105
ORF1ab/nsp4325S325StcAtcG11AY.690.000187
ORF1ab/nsp4325S325StcAtcG11AY.99.20.000092
ORF1ab/nsp4325S325StcAtcG11B0.000128
ORF1ab/nsp4325S325StcAtcG11B.1.1.10.000327
ORF1ab/nsp4325S325StcAtcG11B.1.1.3060.000438
ORF1ab/nsp4325S325StcAtcG11B.1.1.5190.00004
ORF1ab/nsp4325S325StcAtcG11B.1.1.5240.020833
ORF1ab/nsp4325S325StcAtcG11B.1.1260.001276
ORF1ab/nsp4325S325StcAtcG11B.1.1460.004237
ORF1ab/nsp4325S325StcAtcG11B.1.177.460.000918
ORF1ab/nsp4325S325StcAtcT11B.1.2210.000071
ORF1ab/nsp4325S325StcAtcG11B.1.3110.000275
ORF1ab/nsp4325S325StcAtcG11B.1.3510.00003
ORF1ab/nsp4325S325StcAtcG11B.1.3690.000285
ORF1ab/nsp4325S325StcAtcG11B.1.4270.00005
ORF1ab/nsp4325S325StcAtcG11B.1.4290.000024
ORF1ab/nsp4325S325StcAtcG11B.1.4520.013699
ORF1ab/nsp4325S325StcAtcG11B.1.5260.000024
ORF1ab/nsp4325S325StcAtcG11B.1.5770.000687
ORF1ab/nsp4325S325StcAtcG11C.370.000116
ORF1ab/nsp4325S325StcAtcG11P.1.150.000232
ORF1ab/nsp4325S325StcAtcG11P.1.160.000374
ORF1ab/nsp4325S325StcAtcG11Q.40.000455
ORF1ab/nsp4325S325StcAtcG11R.10.00009
ORF1ab/nsp4325S325StcAtcG11W.10.008696
ORF1ab/nsp4325S325StcAtcG11W.30.005263