CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S281L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4281S281LS3044LnonsyntCatTa8558540.998839395-9397
ORF1ab/nsp4281S281LS3044LnonsyntCAtTG85510.001169599395-9397

Details of the mutation S281L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4281S281LtCatTa854855All0.000163
ORF1ab/nsp4281S281LtCAtTG1855All0
ORF1ab/nsp4281S281LtCatTa476476B.1.1.70.000426
ORF1ab/nsp4281S281LtCatTa9696B.1.5260.002256
ORF1ab/nsp4281S281LtCatTa6464P.10.001008
ORF1ab/nsp4281S281LtCatTa2727B.1.617.20.000102
ORF1ab/nsp4281S281LtCatTa1717B.1.4290.0004
ORF1ab/nsp4281S281LtCatTa1717B.1.6370.001242
ORF1ab/nsp4281S281LtCatTa1010B.1.1.5190.000397
ORF1ab/nsp4281S281LtCatTa1010P.1.100.002695
ORF1ab/nsp4281S281LtCatTa99B.1.20.000079
ORF1ab/nsp4281S281LtCatTa99B.1.3510.000268
ORF1ab/nsp4281S281LtCatTa77AY.260.000198
ORF1ab/nsp4281S281LtCatTa77B.1.4270.000353
ORF1ab/nsp4281S281LtCatTa66B.1.1.3180.001811
ORF1ab/nsp4281S281LtCatTa66P.1.170.000971
ORF1ab/nsp4281S281LtCatTa66R.10.00054
ORF1ab/nsp4281S281LtCatTa55AY.250.00003
ORF1ab/nsp4281S281LtCatTa55AY.30.00005
ORF1ab/nsp4281S281LtCatTa55B.1.1.5230.007812
ORF1ab/nsp4281S281LtCatTa55B.1.6210.000443
ORF1ab/nsp4281S281LtCatTa55Q.30.000725
ORF1ab/nsp4281S281LtCatTa44B.1.1.280.001245
ORF1ab/nsp4281S281LtCatTa33AY.130.000483
ORF1ab/nsp4281S281LtCatTa33AY.440.000018
ORF1ab/nsp4281S281LtCatTa33B.1.1770.00004
ORF1ab/nsp4281S281LtCatTa33B.1.621.10.001517
ORF1ab/nsp4281S281LtCatTa33C.370.000348
ORF1ab/nsp4281S281LtCatTa33P.1.130.002695
ORF1ab/nsp4281S281LtCatTa22A.2.50.000998
ORF1ab/nsp4281S281LtCAtTG12AY.40.000002
ORF1ab/nsp4281S281LtCatTa12AY.40.000002
ORF1ab/nsp4281S281LtCatTa22AZ.30.00304
ORF1ab/nsp4281S281LtCatTa22B.10.000018
ORF1ab/nsp4281S281LtCatTa22B.1.10.000036
ORF1ab/nsp4281S281LtCatTa22B.1.5750.000607
ORF1ab/nsp4281S281LtCatTa22B.1.6310.006734
ORF1ab/nsp4281S281LtCatTa22B.1.6360.013423
ORF1ab/nsp4281S281LtCatTa11A.10.000282
ORF1ab/nsp4281S281LtCatTa11AY.10.000396
ORF1ab/nsp4281S281LtCatTa11AY.100.00053
ORF1ab/nsp4281S281LtCatTa11AY.1030.000006
ORF1ab/nsp4281S281LtCatTa11AY.1130.000142
ORF1ab/nsp4281S281LtCatTa11AY.1200.000037
ORF1ab/nsp4281S281LtCatTa11AY.20.000356
ORF1ab/nsp4281S281LtCatTa11AY.3.10.000085
ORF1ab/nsp4281S281LtCatTa11AY.390.000025
ORF1ab/nsp4281S281LtCatTa11B0.000128
ORF1ab/nsp4281S281LtCatTa11B.1.177.310.011494
ORF1ab/nsp4281S281LtCatTa11B.1.258.140.00098
ORF1ab/nsp4281S281LtCatTa11B.1.3490.000715
ORF1ab/nsp4281S281LtCatTa11B.1.3670.000792
ORF1ab/nsp4281S281LtCatTa11B.1.4000.000429
ORF1ab/nsp4281S281LtCatTa11B.1.5250.000113
ORF1ab/nsp4281S281LtCatTa11B.1.5610.000397
ORF1ab/nsp4281S281LtCatTa11B.1.5960.000087
ORF1ab/nsp4281S281LtCatTa11B.1.617.10.000129
ORF1ab/nsp4281S281LtCatTa11B.1.6280.000352
ORF1ab/nsp4281S281LtCatTa11C.36.30.000567
ORF1ab/nsp4281S281LtCatTa11C.36.3.10.002717
ORF1ab/nsp4281S281LtCatTa11P.20.000187
ORF1ab/nsp4281S281LtCatTa11Q.40.000455
ORF1ab/nsp4281S281LtCatTa11Q.50.016949