CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S238del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4238S238del1S3001del1delagTag-310.3333339266-9268
ORF1ab/nsp4238S238del1S3001del1delAGT-NN310.3333339266-9268
ORF1ab/nsp4238S238del1S3001del1delAgt-gt310.3333339266-9268

Details of the mutation S238del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4238S238del1agTag-13All0
ORF1ab/nsp4238S238del1AGT-NN13All0
ORF1ab/nsp4238S238del1Agt-gt13All0
ORF1ab/nsp4238S238del1Agt-gt11B.1.10.000018
ORF1ab/nsp4238S238del1AGT-NN11B.1.5260.000024
ORF1ab/nsp4238S238del1agTag-11B.1.6210.000089