CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S238T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4238S238TS3001TnonsynaGtaCt37360.9729739266-9268
ORF1ab/nsp4238S238TS3001TnonsynaGTaCC3710.0270279266-9268

Details of the mutation S238T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4238S238TaGtaCt3637All0.000007
ORF1ab/nsp4238S238TaGTaCC137All0
ORF1ab/nsp4238S238TaGtaCt78B.1.1.70.000006
ORF1ab/nsp4238S238TaGTaCC18B.1.1.70.000001
ORF1ab/nsp4238S238TaGtaCt44B.10.000037
ORF1ab/nsp4238S238TaGtaCt33B.1.1770.00004
ORF1ab/nsp4238S238TaGtaCt22B.1.10.000036
ORF1ab/nsp4238S238TaGtaCt22B.1.6210.000177
ORF1ab/nsp4238S238TaGtaCt22D.20.00015
ORF1ab/nsp4238S238TaGtaCt11A.23.10.000704
ORF1ab/nsp4238S238TaGtaCt11AY.240.000431
ORF1ab/nsp4238S238TaGtaCt11AY.250.000006
ORF1ab/nsp4238S238TaGtaCt11AY.330.000067
ORF1ab/nsp4238S238TaGtaCt11AY.40.000002
ORF1ab/nsp4238S238TaGtaCt11AY.4.20.000022
ORF1ab/nsp4238S238TaGtaCt11AY.430.000004
ORF1ab/nsp4238S238TaGtaCt11B.1.177.160.000664
ORF1ab/nsp4238S238TaGtaCt11B.1.20.000009
ORF1ab/nsp4238S238TaGtaCt11B.1.2390.001221
ORF1ab/nsp4238S238TaGtaCt11B.1.2430.00007
ORF1ab/nsp4238S238TaGtaCt11B.1.466.20.000391
ORF1ab/nsp4238S238TaGtaCt11B.1.4680.005714
ORF1ab/nsp4238S238TaGtaCt11B.1.5110.034483
ORF1ab/nsp4238S238TaGtaCt11B.1.5250.000113
ORF1ab/nsp4238S238TaGtaCt11B.1.617.20.000004