CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = S163F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4163S163FS2926FnonsyntCttTt181118100.9994489041-9043
ORF1ab/nsp4163S163FS2926FnonsyntCTtTC181110.0005521819041-9043

Details of the mutation S163F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4163S163FtCttTt18101811All0.000346
ORF1ab/nsp4163S163FtCTtTC11811All0
ORF1ab/nsp4163S163FtCttTt356356B.1.20.003135
ORF1ab/nsp4163S163FtCttTt195195B.1.1.70.000175
ORF1ab/nsp4163S163FtCttTt149149B.1.6321
ORF1ab/nsp4163S163FtCttTt100100AY.40.000156
ORF1ab/nsp4163S163FtCttTt8888B.1.2430.006123
ORF1ab/nsp4163S163FtCttTt6969B.1.243.21
ORF1ab/nsp4163S163FtCttTt5454AY.260.001529
ORF1ab/nsp4163S163FtCttTt4646AY.140.004049
ORF1ab/nsp4163S163FtCttTt4646B.1.4290.001082
ORF1ab/nsp4163S163FtCttTt4343AY.230.002999
ORF1ab/nsp4163S163FtCttTt4040B.1.617.20.000151
ORF1ab/nsp4163S163FtCttTt3838AY.1190.001342
ORF1ab/nsp4163S163FtCttTt3838AY.30.000378
ORF1ab/nsp4163S163FtCttTt3636B.1.258.170.003743
ORF1ab/nsp4163S163FtCttTt3434B.1.6210.00301
ORF1ab/nsp4163S163FtCttTt3232AY.250.000192
ORF1ab/nsp4163S163FtCttTt3232B.10.000293
ORF1ab/nsp4163S163FtCttTt2424B.1.438.10.002574
ORF1ab/nsp4163S163FtCttTt2020AY.1030.000124
ORF1ab/nsp4163S163FtCttTt1919B.1.36.80.019
ORF1ab/nsp4163S163FtCttTt1919P.10.000299
ORF1ab/nsp4163S163FtCttTt1717B.1.1770.000224
ORF1ab/nsp4163S163FtCttTt1616B.1.177.810.003029
ORF1ab/nsp4163S163FtCttTt1616B.1.4710.043716
ORF1ab/nsp4163S163FtCttTt1515AY.60.000617
ORF1ab/nsp4163S163FtCttTt1414AY.430.000062
ORF1ab/nsp4163S163FtCttTt1212P.20.00224
ORF1ab/nsp4163S163FtCttTt1111AY.7.10.00124
ORF1ab/nsp4163S163FtCttTt1111B.1.10.0002
ORF1ab/nsp4163S163FtCttTt1111B.1.3510.000327
ORF1ab/nsp4163S163FtCttTt1010B.1.1600.000312
ORF1ab/nsp4163S163FtCttTt1010B.1.6370.000731
ORF1ab/nsp4163S163FtCttTt99AY.99.20.000829
ORF1ab/nsp4163S163FtCttTt88AY.440.000049
ORF1ab/nsp4163S163FtCttTt77AY.200.000272
ORF1ab/nsp4163S163FtCttTt66AY.50.000124
ORF1ab/nsp4163S163FtCttTt66B.1.1.1150.053571
ORF1ab/nsp4163S163FtCttTt55AY.390.000124
ORF1ab/nsp4163S163FtCttTt55AY.39.10.000198
ORF1ab/nsp4163S163FtCttTt55AY.470.000156
ORF1ab/nsp4163S163FtCttTt55B.1.4000.002145
ORF1ab/nsp4163S163FtCttTt55B.1.5260.000118
ORF1ab/nsp4163S163FtCttTt55P.50.068493
ORF1ab/nsp4163S163FtCttTt44AY.1200.000149
ORF1ab/nsp4163S163FtCttTt44AY.330.000267
ORF1ab/nsp4163S163FtCttTt44B.1.1.2140.000222
ORF1ab/nsp4163S163FtCttTt44B.1.6090.001918
ORF1ab/nsp4163S163FtCttTt230.111111
ORF1ab/nsp4163S163FtCTtTC130.055556
ORF1ab/nsp4163S163FtCttTt33A0.001161
ORF1ab/nsp4163S163FtCttTt33B.1.1.3330.003229
ORF1ab/nsp4163S163FtCttTt33B.1.2210.000213
ORF1ab/nsp4163S163FtCttTt33B.1.5870.005693
ORF1ab/nsp4163S163FtCttTt33B.1.5950.000783
ORF1ab/nsp4163S163FtCttTt33B.1.6230.001609
ORF1ab/nsp4163S163FtCttTt33P.1.150.000697
ORF1ab/nsp4163S163FtCttTt22AY.1010.000981
ORF1ab/nsp4163S163FtCttTt22AY.1020.000053
ORF1ab/nsp4163S163FtCttTt22AY.290.000032
ORF1ab/nsp4163S163FtCttTt22AY.4.20.000043
ORF1ab/nsp4163S163FtCttTt22AY.450.000243
ORF1ab/nsp4163S163FtCttTt22AY.630.000774
ORF1ab/nsp4163S163FtCttTt22AY.750.000112
ORF1ab/nsp4163S163FtCttTt22B.1.1.3060.000877
ORF1ab/nsp4163S163FtCttTt22B.1.3110.000549
ORF1ab/nsp4163S163FtCttTt22B.1.36.240.012346
ORF1ab/nsp4163S163FtCttTt22B.1.4270.000101
ORF1ab/nsp4163S163FtCttTt22B.1.5230.004902
ORF1ab/nsp4163S163FtCttTt22B.1.617.10.000258
ORF1ab/nsp4163S163FtCttTt22B.1.6200.001892
ORF1ab/nsp4163S163FtCttTt11AY.1060.000335
ORF1ab/nsp4163S163FtCttTt11AY.1110.000183
ORF1ab/nsp4163S163FtCttTt11AY.1130.000142
ORF1ab/nsp4163S163FtCttTt11AY.1140.000231
ORF1ab/nsp4163S163FtCttTt11AY.1180.000063
ORF1ab/nsp4163S163FtCttTt11AY.1210.000135
ORF1ab/nsp4163S163FtCttTt11AY.16.10.00047
ORF1ab/nsp4163S163FtCttTt11AY.270.000065
ORF1ab/nsp4163S163FtCttTt11AY.29.10.000221
ORF1ab/nsp4163S163FtCttTt11AY.300.000396
ORF1ab/nsp4163S163FtCttTt11AY.39.20.001541
ORF1ab/nsp4163S163FtCttTt11AY.4.2.10.000149
ORF1ab/nsp4163S163FtCttTt11AY.4.50.000107
ORF1ab/nsp4163S163FtCttTt11AY.410.000294
ORF1ab/nsp4163S163FtCttTt11AY.5.30.000337
ORF1ab/nsp4163S163FtCttTt11AY.720.001361
ORF1ab/nsp4163S163FtCttTt11AY.740.000116
ORF1ab/nsp4163S163FtCttTt11AY.9.20.000037
ORF1ab/nsp4163S163FtCttTt11AY.970.001701
ORF1ab/nsp4163S163FtCttTt11AY.98.10.000048
ORF1ab/nsp4163S163FtCttTt11B.1.1.1760.000439
ORF1ab/nsp4163S163FtCttTt11B.1.1.2160.00089
ORF1ab/nsp4163S163FtCttTt11B.1.1.2220.000204
ORF1ab/nsp4163S163FtCttTt11B.1.1.2410.00207
ORF1ab/nsp4163S163FtCttTt11B.1.1.280.000311
ORF1ab/nsp4163S163FtCttTt11B.1.1.2840.000107
ORF1ab/nsp4163S163FtCttTt11B.1.1.3170.000412
ORF1ab/nsp4163S163FtCttTt11B.1.1.3260.001761
ORF1ab/nsp4163S163FtCttTt11B.1.1.3480.000796
ORF1ab/nsp4163S163FtCttTt11B.1.1.440.00241
ORF1ab/nsp4163S163FtCttTt11B.1.160.160.000929
ORF1ab/nsp4163S163FtCttTt11B.1.177.460.000918
ORF1ab/nsp4163S163FtCttTt11B.1.177.570.000281
ORF1ab/nsp4163S163FtCttTt11B.1.2410.000812
ORF1ab/nsp4163S163FtCttTt11B.1.360.000146
ORF1ab/nsp4163S163FtCttTt11B.1.3670.000792
ORF1ab/nsp4163S163FtCttTt11B.1.3690.000285
ORF1ab/nsp4163S163FtCttTt11B.1.3960.000706
ORF1ab/nsp4163S163FtCttTt11B.1.3970.004854
ORF1ab/nsp4163S163FtCttTt11B.1.5480.035714
ORF1ab/nsp4163S163FtCttTt11B.1.5600.00463
ORF1ab/nsp4163S163FtCttTt11B.1.5760.000907
ORF1ab/nsp4163S163FtCttTt11B.1.5800.004065
ORF1ab/nsp4163S163FtCttTt11B.1.5880.00091
ORF1ab/nsp4163S163FtCttTt11B.1.596.10.009346
ORF1ab/nsp4163S163FtCttTt11B.1.6280.000352
ORF1ab/nsp4163S163FtCttTt11B.280.003279
ORF1ab/nsp4163S163FtCttTt11C.370.000116
ORF1ab/nsp4163S163FtCttTt11D.20.000075
ORF1ab/nsp4163S163FtCttTt11N.90.005952
ORF1ab/nsp4163S163FtCttTt11P.1.120.000484
ORF1ab/nsp4163S163FtCttTt11P.1.140.000048
ORF1ab/nsp4163S163FtCttTt11P.1.170.000162
ORF1ab/nsp4163S163FtCttTt11Q.80.000165
ORF1ab/nsp4163S163FtCttTt11R.10.00009
ORF1ab/nsp4163S163FtCttTt11W.20.004831