CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = R401C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4401R401CR3164CnonsynCgtTgt141419755-9757

Details of the mutation R401C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4401R401CCgtTgt1414All0.000003
ORF1ab/nsp4401R401CCgtTgt22B.1.10.000036
ORF1ab/nsp4401R401CCgtTgt22B.1.1.70.000002
ORF1ab/nsp4401R401CCgtTgt11AT.10.005128
ORF1ab/nsp4401R401CCgtTgt11AY.440.000006
ORF1ab/nsp4401R401CCgtTgt11B.10.000009
ORF1ab/nsp4401R401CCgtTgt11B.1.177.770.000726
ORF1ab/nsp4401R401CCgtTgt11B.1.20.000009
ORF1ab/nsp4401R401CCgtTgt11B.1.3960.000706
ORF1ab/nsp4401R401CCgtTgt11B.1.5800.004065
ORF1ab/nsp4401R401CCgtTgt11B.1.5960.000087
ORF1ab/nsp4401R401CCgtTgt11B.1.617.20.000004
ORF1ab/nsp4401R401CCgtTgt11D.20.000075