CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = R222del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4222R222del1R2985del1delaGga-g840.59218-9220
ORF1ab/nsp4222R222del1R2985del1delAgg-gg830.3759218-9220
ORF1ab/nsp4222R222del1R2985del1delagGag-810.1259218-9220

Details of the mutation R222del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4222R222del1aGga-g48All0.000001
ORF1ab/nsp4222R222del1Agg-gg38All0.000001
ORF1ab/nsp4222R222del1agGag-18All0
ORF1ab/nsp4222R222del1aGga-g22B.1.177.210.000153
ORF1ab/nsp4222R222del1Agg-gg22B.1.6270.00404
ORF1ab/nsp4222R222del1agGag-11AY.360.000148
ORF1ab/nsp4222R222del1Agg-gg11AY.50.000021
ORF1ab/nsp4222R222del1aGga-g11B.10.000009
ORF1ab/nsp4222R222del1aGga-g11B.1.617.30.002985