CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = R222K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4222R222KR2985KnonsynaGgaAg1491470.9865779218-9220
ORF1ab/nsp4222R222KR2985KnonsynaGGaAA14920.01342289218-9220

Details of the mutation R222K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4222R222KaGgaAg147149All0.000028
ORF1ab/nsp4222R222KaGGaAA2149All0
ORF1ab/nsp4222R222KaGgaAg2424AY.250.000144
ORF1ab/nsp4222R222KaGgaAg2021AY.40.000031
ORF1ab/nsp4222R222KaGGaAA121AY.40.000002
ORF1ab/nsp4222R222KaGgaAg1919B.1.617.20.000072
ORF1ab/nsp4222R222KaGgaAg1616B.1.1.70.000014
ORF1ab/nsp4222R222KaGgaAg1212B.10.00011
ORF1ab/nsp4222R222KaGgaAg99AY.30.00009
ORF1ab/nsp4222R222KaGgaAg77AY.440.000043
ORF1ab/nsp4222R222KaGgaAg340.166667
ORF1ab/nsp4222R222KaGGaAA140.055556
ORF1ab/nsp4222R222KaGgaAg44AY.330.000267
ORF1ab/nsp4222R222KaGgaAg33AY.1030.000019
ORF1ab/nsp4222R222KaGgaAg33B.1.2430.000209
ORF1ab/nsp4222R222KaGgaAg22AY.290.000032
ORF1ab/nsp4222R222KaGgaAg22AY.50.000041
ORF1ab/nsp4222R222KaGgaAg22B.1.10.000036
ORF1ab/nsp4222R222KaGgaAg22B.1.2210.000142
ORF1ab/nsp4222R222KaGgaAg11AY.1010.00049
ORF1ab/nsp4222R222KaGgaAg11AY.1020.000027
ORF1ab/nsp4222R222KaGgaAg11AY.1100.000113
ORF1ab/nsp4222R222KaGgaAg11AY.1180.000063
ORF1ab/nsp4222R222KaGgaAg11AY.1200.000037
ORF1ab/nsp4222R222KaGgaAg11AY.200.000039
ORF1ab/nsp4222R222KaGgaAg11AY.430.000004
ORF1ab/nsp4222R222KaGgaAg11AY.470.000031
ORF1ab/nsp4222R222KaGgaAg11AY.610.000105
ORF1ab/nsp4222R222KaGgaAg11AY.880.000884
ORF1ab/nsp4222R222KaGgaAg11B0.000128
ORF1ab/nsp4222R222KaGgaAg11B.1.1.3170.000412
ORF1ab/nsp4222R222KaGgaAg11B.1.20.000009
ORF1ab/nsp4222R222KaGgaAg11B.1.2580.000067
ORF1ab/nsp4222R222KaGgaAg11B.1.258.170.000104
ORF1ab/nsp4222R222KaGgaAg11B.1.4290.000024
ORF1ab/nsp4222R222KaGgaAg11B.1.5960.000087
ORF1ab/nsp4222R222KaGgaAg11B.1.6210.000089
ORF1ab/nsp4222R222KaGgaAg11Q.80.000165