CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = L471del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4471L471del1L3234del1delCtc-tc640.6666679965-9967
ORF1ab/nsp4471L471del1L3234del1delctCct-610.1666679965-9967
ORF1ab/nsp4471L471del1L3234del1delcTcc-c610.1666679965-9967

Details of the mutation L471del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4471L471del1Ctc-tc46All0.000001
ORF1ab/nsp4471L471del1ctCct-16All0
ORF1ab/nsp4471L471del1cTcc-c16All0
ORF1ab/nsp4471L471del1Ctc-tc22B.10.000018
ORF1ab/nsp4471L471del1Ctc-tc22B.1.1.70.000002
ORF1ab/nsp4471L471del1cTcc-c11AY.1190.000035
ORF1ab/nsp4471L471del1ctCct-11AY.120.10.000321