CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = L471L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4471L471LL3234LsynctCctT969396070.9911289965-9967
ORF1ab/nsp4471L471LL3234LsynctCctA9693830.008562889965-9967
ORF1ab/nsp4471L471LL3234LsynctCctG969320.0002063349965-9967
ORF1ab/nsp4471L471LL3234LsynCtCTtG969310.0001031679965-9967

Details of the mutation L471L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4471L471LctCctT96079693All0.001837
ORF1ab/nsp4471L471LctCctA839693All0.000016
ORF1ab/nsp4471L471LctCctG29693All0
ORF1ab/nsp4471L471LCtCTtG19693All0
ORF1ab/nsp4471L471LctCctT16951705B.1.1.70.001517
ORF1ab/nsp4471L471LctCctA101705B.1.1.70.000009
ORF1ab/nsp4471L471LctCctT802802B.1.617.20.00302
ORF1ab/nsp4471L471LctCctT734734B.1.4270.037065
ORF1ab/nsp4471L471LctCctT620622AY.40.000965
ORF1ab/nsp4471L471LctCctA2622AY.40.000003
ORF1ab/nsp4471L471LctCctT405408B.1.10.007347
ORF1ab/nsp4471L471LctCctA2408B.1.10.000036
ORF1ab/nsp4471L471LctCctG1408B.1.10.000018
ORF1ab/nsp4471L471LctCctT400404B.10.003664
ORF1ab/nsp4471L471LctCctA4404B.10.000037
ORF1ab/nsp4471L471LctCctT397399AY.430.001759
ORF1ab/nsp4471L471LctCctA2399AY.430.000009
ORF1ab/nsp4471L471LctCctT391391B.1.3360.953659
ORF1ab/nsp4471L471LctCctT317317AY.250.001907
ORF1ab/nsp4471L471LctCctT194195AY.440.001181
ORF1ab/nsp4471L471LctCctA1195AY.440.000006
ORF1ab/nsp4471L471LctCctT184184B.1.1770.002423
ORF1ab/nsp4471L471LctCctT182182B.1.20.001603
ORF1ab/nsp4471L471LctCctT178178AY.420.007161
ORF1ab/nsp4471L471LctCctT173177AY.30.001721
ORF1ab/nsp4471L471LctCctA4177AY.30.00004
ORF1ab/nsp4471L471LctCctT170170AY.1200.00632
ORF1ab/nsp4471L471LctCctT151152AY.1030.000938
ORF1ab/nsp4471L471LctCctA1152AY.1030.000006
ORF1ab/nsp4471L471LctCctT144144AY.930.039323
ORF1ab/nsp4471L471LctCctT128131B.1.4290.003012
ORF1ab/nsp4471L471LctCctA3131B.1.4290.000071
ORF1ab/nsp4471L471LctCctT122122B.1.438.10.013086
ORF1ab/nsp4471L471LctCctT9696P.10.001512
ORF1ab/nsp4471L471LctCctT7676B.1.3490.054325
ORF1ab/nsp4471L471LctCctT7070B.1.5260.001645
ORF1ab/nsp4471L471LctCctT6969Q.30.010007
ORF1ab/nsp4471L471LctCctT6767AY.1020.001776
ORF1ab/nsp4471L471LctCctT6262B.1.177.810.011738
ORF1ab/nsp4471L471LctCctT6060B.1.1.3361
ORF1ab/nsp4471L471LctCctT5657B.1.1600.001747
ORF1ab/nsp4471L471LctCctA157B.1.1600.000031
ORF1ab/nsp4471L471LctCctT5454B.1.3510.001605
ORF1ab/nsp4471L471LctCctT5151AY.1000.002346
ORF1ab/nsp4471L471LctCctT4444AY.390.001087
ORF1ab/nsp4471L471LctCctT4141AY.260.001161
ORF1ab/nsp4471L471LctCctT4141AY.470.001275
ORF1ab/nsp4471L471LctCctT3838AY.4.20.000824
ORF1ab/nsp4471L471LctCctT3838AY.50.000785
ORF1ab/nsp4471L471LctCctA3536P.1.70.011175
ORF1ab/nsp4471L471LctCctT136P.1.70.000319
ORF1ab/nsp4471L471LctCctT3333AY.1190.001165
ORF1ab/nsp4471L471LctCctT3131AY.230.002162
ORF1ab/nsp4471L471LctCctT3030B.1.177.600.006553
ORF1ab/nsp4471L471LctCctT1830B.1.5960.001568
ORF1ab/nsp4471L471LctCctA1230B.1.5960.001046
ORF1ab/nsp4471L471LctCctT2929B.1.1.1191
ORF1ab/nsp4471L471LctCctT2929B.1.1.3581
ORF1ab/nsp4471L471LctCctT2929B.1.258.30.048576
ORF1ab/nsp4471L471LctCctT2828AY.980.002212
ORF1ab/nsp4471L471LctCctT2626AY.1130.003702
ORF1ab/nsp4471L471LctCctT2626B.1.177.570.007305
ORF1ab/nsp4471L471LctCctT2525B.1.1.5190.000993
ORF1ab/nsp4471L471LctCctT2425B.1.617.10.003095
ORF1ab/nsp4471L471LCtCTtG125B.1.617.10.000129
ORF1ab/nsp4471L471LctCctT2424B.1.5750.007282
ORF1ab/nsp4471L471LctCctT2323B.1.5300.164286
ORF1ab/nsp4471L471LctCctT2222AY.1160.006309
ORF1ab/nsp4471L471LctCctT2121B.1.1.2220.004284
ORF1ab/nsp4471L471LctCctT2020AY.9.20.000735
ORF1ab/nsp4471L471LctCctT1919AY.1060.006363
ORF1ab/nsp4471L471LctCctT1919AY.1210.002571
ORF1ab/nsp4471L471LctCctT1919AY.200.000738
ORF1ab/nsp4471L471LctCctT1919B.1.1.2800.058642
ORF1ab/nsp4471L471LctCctT1818B.1.177.770.013072
ORF1ab/nsp4471L471LctCctT1717AY.46.10.017454
ORF1ab/nsp4471L471LctCctT1616AY.460.001665
ORF1ab/nsp4471L471LctCctT1516B0.001917
ORF1ab/nsp4471L471LctCctA116B0.000128
ORF1ab/nsp4471L471LctCctT1616B.1.177.440.008303
ORF1ab/nsp4471L471LctCctT1516B.1.258.170.00156
ORF1ab/nsp4471L471LctCctA116B.1.258.170.000104
ORF1ab/nsp4471L471LctCctT1515AY.330.001002
ORF1ab/nsp4471L471LctCctT1515AY.830.025862
ORF1ab/nsp4471L471LctCctT1515B.1.6370.001096
ORF1ab/nsp4471L471LctCctT1515R.10.00135
ORF1ab/nsp4471L471LctCctT1212AY.290.000189
ORF1ab/nsp4471L471LctCctT1212B.1.6210.001062
ORF1ab/nsp4471L471LctCctT1212P.1.140.000574
ORF1ab/nsp4471L471LctCctT1111AY.340.001067
ORF1ab/nsp4471L471LctCctT1111AY.39.10.000436
ORF1ab/nsp4471L471LctCctT1111B.1.5250.001245
ORF1ab/nsp4471L471LctCctT1111B.1.5660.211538
ORF1ab/nsp4471L471LctCctT1111Q.10.00139
ORF1ab/nsp4471L471LctCctT1010AY.60.000411
ORF1ab/nsp4471L471LctCctT99AY.4.30.007576
ORF1ab/nsp4471L471LctCctT99AY.840.003937
ORF1ab/nsp4471L471LctCctT89AY.98.10.000387
ORF1ab/nsp4471L471LctCctG19AY.98.10.000048
ORF1ab/nsp4471L471LctCctT99B.1.1.3470.163636
ORF1ab/nsp4471L471LctCctT99B.1.2060.007341
ORF1ab/nsp4471L471LctCctT88AY.270.000518
ORF1ab/nsp4471L471LctCctT88AY.450.000973
ORF1ab/nsp4471L471LctCctT88B.1.1.2140.000444
ORF1ab/nsp4471L471LctCctT88B.1.1.3170.003294
ORF1ab/nsp4471L471LctCctT88B.1.2580.000532
ORF1ab/nsp4471L471LctCctT77AY.46.40.001152
ORF1ab/nsp4471L471LctCctT77AY.46.60.000505
ORF1ab/nsp4471L471LctCctT77B.1.2210.000497
ORF1ab/nsp4471L471LctCctT77B.1.2430.000487
ORF1ab/nsp4471L471LctCctT77B.1.2930.0875
ORF1ab/nsp4471L471LctCctT77B.1.36.10.007982
ORF1ab/nsp4471L471LctCctT66AY.130.000966
ORF1ab/nsp4471L471LctCctT66AY.160.002278
ORF1ab/nsp4471L471LctCctT66AY.360.000889
ORF1ab/nsp4471L471LctCctT66AY.4.50.000645
ORF1ab/nsp4471L471LctCctT66B.1.351.20.001815
ORF1ab/nsp4471L471LctCctT66B.1.360.000875
ORF1ab/nsp4471L471LctCctT66C.370.000696
ORF1ab/nsp4471L471LctCctT66P.1.150.001394
ORF1ab/nsp4471L471LctCctT66P.20.00112
ORF1ab/nsp4471L471LctCctT66Q.80.000989
ORF1ab/nsp4471L471LctCctT66V.10.136364
ORF1ab/nsp4471L471LctCctT66W.40.008108
ORF1ab/nsp4471L471LctCctT55AY.1170.000423
ORF1ab/nsp4471L471LctCctT55AY.1180.000313
ORF1ab/nsp4471L471LctCctT55AY.140.00044
ORF1ab/nsp4471L471LctCctT55AY.300.001979
ORF1ab/nsp4471L471LctCctT55AY.670.002321
ORF1ab/nsp4471L471LctCctT55AY.790.006053
ORF1ab/nsp4471L471LctCctT55B.1.1.1860.017182
ORF1ab/nsp4471L471LctCctT55B.1.1.3350.064935
ORF1ab/nsp4471L471LctCctT55B.1.177.730.002831
ORF1ab/nsp4471L471LctCctT55B.1.177.850.027174
ORF1ab/nsp4471L471LctCctT55B.1.4590.020408
ORF1ab/nsp4471L471LctCctT55B.1.5880.00455
ORF1ab/nsp4471L471LctCctT55C.160.005302
ORF1ab/nsp4471L471LctCctT55D.20.000375
ORF1ab/nsp4471L471LctCctT44AY.610.000419
ORF1ab/nsp4471L471LctCctT44AY.620.001743
ORF1ab/nsp4471L471LctCctT44AY.750.000224
ORF1ab/nsp4471L471LctCctT44B.1.1.2160.003562
ORF1ab/nsp4471L471LctCctT44B.1.1.280.001245
ORF1ab/nsp4471L471LctCctT44B.1.1.3550.061538
ORF1ab/nsp4471L471LctCctT44B.1.1.3820.142857
ORF1ab/nsp4471L471LctCctT44B.1.1.500.002716
ORF1ab/nsp4471L471LctCctT44B.1.1.540.012085
ORF1ab/nsp4471L471LctCctT44B.1.160.260.009685
ORF1ab/nsp4471L471LctCctT44B.1.177.120.000607
ORF1ab/nsp4471L471LctCctT44B.1.177.320.005398
ORF1ab/nsp4471L471LctCctT44B.1.3110.001098
ORF1ab/nsp4471L471LctCctT44B.1.6090.001918
ORF1ab/nsp4471L471LctCctT44B.1.617.30.01194
ORF1ab/nsp4471L471LctCctT44B.1.6280.001409
ORF1ab/nsp4471L471LctCctT23A.20.001324
ORF1ab/nsp4471L471LctCctA13A.20.000662
ORF1ab/nsp4471L471LctCctT33AY.16.10.00141
ORF1ab/nsp4471L471LctCctT23AY.3.10.000171
ORF1ab/nsp4471L471LctCctA13AY.3.10.000085
ORF1ab/nsp4471L471LctCctT33AY.5.40.00083
ORF1ab/nsp4471L471LctCctT33AY.850.001282
ORF1ab/nsp4471L471LctCctT33AY.90.000203
ORF1ab/nsp4471L471LctCctT33B.1.1.250.001706
ORF1ab/nsp4471L471LctCctT33B.1.1.3030.008287
ORF1ab/nsp4471L471LctCctT33B.1.1.3060.001315
ORF1ab/nsp4471L471LctCctT33B.1.1.330.001263
ORF1ab/nsp4471L471LctCctT33B.1.1.5230.004687
ORF1ab/nsp4471L471LctCctT33B.1.1.630.001157
ORF1ab/nsp4471L471LctCctT33B.1.2340.000396
ORF1ab/nsp4471L471LctCctT33B.1.36.180.001261
ORF1ab/nsp4471L471LctCctT33B.1.36.250.006623
ORF1ab/nsp4471L471LctCctT33B.1.36.290.001552
ORF1ab/nsp4471L471LctCctT33B.1.3690.000856
ORF1ab/nsp4471L471LctCctT33B.1.390.011719
ORF1ab/nsp4471L471LctCctT33B.1.4970.000944
ORF1ab/nsp4471L471LctCctT33B.1.5640.001278
ORF1ab/nsp4471L471LctCctT33B.400.001093
ORF1ab/nsp4471L471LctCctT33B.60.00273
ORF1ab/nsp4471L471LctCctT33C.230.017442
ORF1ab/nsp4471L471LctCctT33C.360.002732
ORF1ab/nsp4471L471LctCctT33P.1.40.00293
ORF1ab/nsp4471L471LctCctT22AY.1080.002205
ORF1ab/nsp4471L471LctCctT22AY.1110.000366
ORF1ab/nsp4471L471LctCctT22AY.120.000632
ORF1ab/nsp4471L471LctCctT22AY.550.001835
ORF1ab/nsp4471L471LctCctT22AY.590.001059
ORF1ab/nsp4471L471LctCctT22AY.660.002139
ORF1ab/nsp4471L471LctCctT22AY.730.001331
ORF1ab/nsp4471L471LctCctT22AY.75.10.000361
ORF1ab/nsp4471L471LctCctT22AY.880.001768
ORF1ab/nsp4471L471LctCctT22AY.890.009804
ORF1ab/nsp4471L471LctCctT22AY.9.10.000167
ORF1ab/nsp4471L471LctCctT22AY.920.000575
ORF1ab/nsp4471L471LctCctT22AZ.20.001642
ORF1ab/nsp4471L471LctCctT22B.1.1.10.000653
ORF1ab/nsp4471L471LctCctT22B.1.1.2940.002532
ORF1ab/nsp4471L471LctCctT22B.1.1.3260.003521
ORF1ab/nsp4471L471LctCctT22B.1.1.4340.000697
ORF1ab/nsp4471L471LctCctT22B.1.1.4640.002946
ORF1ab/nsp4471L471LctCctT22B.1.1.700.000682
ORF1ab/nsp4471L471LctCctT22B.1.1.80.007168
ORF1ab/nsp4471L471LctCctT22B.1.1110.00235
ORF1ab/nsp4471L471LctCctT22B.1.120.016
ORF1ab/nsp4471L471LctCctT22B.1.1390.001466
ORF1ab/nsp4471L471LctCctT22B.1.177.560.001335
ORF1ab/nsp4471L471LctCctT22B.1.2400.000431
ORF1ab/nsp4471L471LctCctT22B.1.2410.001623
ORF1ab/nsp4471L471LctCctT22B.1.3560.003454
ORF1ab/nsp4471L471LctCctT22B.1.36.170.000988
ORF1ab/nsp4471L471LctCctT22B.1.4620.014493
ORF1ab/nsp4471L471LctCctT22B.1.466.20.000782
ORF1ab/nsp4471L471LctCctT22B.1.5240.002813
ORF1ab/nsp4471L471LctCctT22B.1.5650.001621
ORF1ab/nsp4471L471LctCctT22B.1.575.10.004878
ORF1ab/nsp4471L471LctCctT22B.1.5800.00813
ORF1ab/nsp4471L471LctCctT22B.230.005848
ORF1ab/nsp4471L471LctCctT22B.3.10.003317
ORF1ab/nsp4471L471LctCctT22B.40.004415
ORF1ab/nsp4471L471LctCctT22C.120.014388
ORF1ab/nsp4471L471LctCctT22P.1.10.000635
ORF1ab/nsp4471L471LctCctT22P.1.100.000539
ORF1ab/nsp4471L471LctCctT11A.2.50.000499
ORF1ab/nsp4471L471LctCctT11A.23.10.000704
ORF1ab/nsp4471L471LctCctT11AD.10.004115
ORF1ab/nsp4471L471LctCctT11AD.20.000219
ORF1ab/nsp4471L471LctCctT11AU.10.001266
ORF1ab/nsp4471L471LctCctT11AY.10.000396
ORF1ab/nsp4471L471LctCctT11AY.100.00053
ORF1ab/nsp4471L471LctCctT11AY.1010.00049
ORF1ab/nsp4471L471LctCctT11AY.1040.001984
ORF1ab/nsp4471L471LctCctT11AY.1070.000466
ORF1ab/nsp4471L471LctCctT11AY.1100.000113
ORF1ab/nsp4471L471LctCctT11AY.120.2.10.000498
ORF1ab/nsp4471L471LctCctT11AY.190.00114
ORF1ab/nsp4471L471LctCctT11AY.20.000356
ORF1ab/nsp4471L471LctCctA11AY.320.000532
ORF1ab/nsp4471L471LctCctT11AY.34.10.00051
ORF1ab/nsp4471L471LctCctT11AY.370.000316
ORF1ab/nsp4471L471LctCctT11AY.4.2.10.000149
ORF1ab/nsp4471L471LctCctT11AY.46.20.000635
ORF1ab/nsp4471L471LctCctT11AY.5.30.000337
ORF1ab/nsp4471L471LctCctT11AY.520.000814
ORF1ab/nsp4471L471LctCctT11AY.540.000095
ORF1ab/nsp4471L471LctCctT11AY.580.000907
ORF1ab/nsp4471L471LctCctT11AY.680.000274
ORF1ab/nsp4471L471LctCctT11AY.690.000187
ORF1ab/nsp4471L471LctCctT11AY.7.10.000113
ORF1ab/nsp4471L471LctCctT11AY.710.000475
ORF1ab/nsp4471L471LctCctT11AY.770.001127
ORF1ab/nsp4471L471LctCctT11AY.820.001357
ORF1ab/nsp4471L471LctCctT11AY.910.00073
ORF1ab/nsp4471L471LctCctT11AY.99.10.001553
ORF1ab/nsp4471L471LctCctT11AY.99.20.000092
ORF1ab/nsp4471L471LctCctT11AZ.10.000867
ORF1ab/nsp4471L471LctCctT11AZ.30.00152
ORF1ab/nsp4471L471LctCctT11B.1.1.1210.002427
ORF1ab/nsp4471L471LctCctT11B.1.1.2040.00304
ORF1ab/nsp4471L471LctCctT11B.1.1.2400.004695
ORF1ab/nsp4471L471LctCctT11B.1.1.2430.004082
ORF1ab/nsp4471L471LctCctT11B.1.1.2840.000107
ORF1ab/nsp4471L471LctCctT11B.1.1.3160.000925
ORF1ab/nsp4471L471LctCctT11B.1.1.3180.000302
ORF1ab/nsp4471L471LctCctT11B.1.1.3330.001076
ORF1ab/nsp4471L471LctCctT11B.1.1.3480.000796
ORF1ab/nsp4471L471LctCctT11B.1.1.3690.000446
ORF1ab/nsp4471L471LctCctT11B.1.1.370.000193
ORF1ab/nsp4471L471LctCctT11B.1.1.3780.007299
ORF1ab/nsp4471L471LctCctT11B.1.1.3980.003226
ORF1ab/nsp4471L471LctCctT11B.1.1.4090.002833
ORF1ab/nsp4471L471LctCctT11B.1.1.4130.006897
ORF1ab/nsp4471L471LctCctT11B.1.1.4200.001006
ORF1ab/nsp4471L471LctCctT11B.1.1.510.001718
ORF1ab/nsp4471L471LctCctT11B.1.1.5170.006803
ORF1ab/nsp4471L471LctCctT11B.1.177.150.000631
ORF1ab/nsp4471L471LctCctT11B.1.177.170.000821
ORF1ab/nsp4471L471LctCctT11B.1.177.180.00116
ORF1ab/nsp4471L471LctCctT11B.1.177.40.000211
ORF1ab/nsp4471L471LctCctT11B.1.177.650.000665
ORF1ab/nsp4471L471LctCctT11B.1.1890.004292
ORF1ab/nsp4471L471LctCctT11B.1.1950.005025
ORF1ab/nsp4471L471LctCctT11B.1.220.001318
ORF1ab/nsp4471L471LctCctT11B.1.258.110.000396
ORF1ab/nsp4471L471LctCctT11B.1.258.210.007752
ORF1ab/nsp4471L471LctCctT11B.1.3240.001605
ORF1ab/nsp4471L471LctCctT11B.1.3320.003497
ORF1ab/nsp4471L471LctCctT11B.1.3340.018182
ORF1ab/nsp4471L471LctCctT11B.1.3400.004292
ORF1ab/nsp4471L471LctCctT11B.1.351.50.0006
ORF1ab/nsp4471L471LctCctT11B.1.36.210.00216
ORF1ab/nsp4471L471LctCctT11B.1.36.80.001
ORF1ab/nsp4471L471LctCctT11B.1.3750.00082
ORF1ab/nsp4471L471LctCctT11B.1.3990.001934
ORF1ab/nsp4471L471LctCctT11B.1.400.019608
ORF1ab/nsp4471L471LctCctT11B.1.4430.004673
ORF1ab/nsp4471L471LctCctT11B.1.4530.003236
ORF1ab/nsp4471L471LctCctT11B.1.4690.00361
ORF1ab/nsp4471L471LctCctT11B.1.4700.001404
ORF1ab/nsp4471L471LctCctT11B.1.5170.000427
ORF1ab/nsp4471L471LctCctT11B.1.5270.003704
ORF1ab/nsp4471L471LctCctT11B.1.5460.003704
ORF1ab/nsp4471L471LctCctT11B.1.5670.003333
ORF1ab/nsp4471L471LctCctT11B.1.5680.001111
ORF1ab/nsp4471L471LctCctT11B.1.5740.002151
ORF1ab/nsp4471L471LctCctT11B.1.5760.000907
ORF1ab/nsp4471L471LctCctT11B.1.5770.000687
ORF1ab/nsp4471L471LctCctT11B.1.5820.000491
ORF1ab/nsp4471L471LctCctT11B.1.5950.000261
ORF1ab/nsp4471L471LctCctT11B.1.619.10.000641
ORF1ab/nsp4471L471LctCctA11B.1.6230.000536
ORF1ab/nsp4471L471LctCctT11B.1.80.001972
ORF1ab/nsp4471L471LctCctT11B.1.9.40.006135
ORF1ab/nsp4471L471LctCctT11B.1.940.027027
ORF1ab/nsp4471L471LctCctT11B.6.80.008264
ORF1ab/nsp4471L471LctCctT11C.10.002392
ORF1ab/nsp4471L471LctCctT11C.140.004329
ORF1ab/nsp4471L471LctCctT11C.390.018868
ORF1ab/nsp4471L471LctCctT11L.10.001905
ORF1ab/nsp4471L471LctCctT11P.1.120.000484
ORF1ab/nsp4471L471LctCctT11P.1.170.000162
ORF1ab/nsp4471L471LctCctT11P.30.001595
ORF1ab/nsp4471L471LctCctT11Q.40.000455
ORF1ab/nsp4471L471LctCctT11Z.10.00289