CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = L435del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4435L435del1L3198del1delctAct-2080.49857-9859
ORF1ab/nsp4435L435del1L3198del1delcTAc-N2080.49857-9859
ORF1ab/nsp4435L435del1L3198del1delCta-ta2030.159857-9859
ORF1ab/nsp4435L435del1L3198del1delcTac-a2010.059857-9859

Details of the mutation L435del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4435L435del1cTAc-N820All0.000002
ORF1ab/nsp4435L435del1ctAct-820All0.000002
ORF1ab/nsp4435L435del1Cta-ta320All0.000001
ORF1ab/nsp4435L435del1cTac-a120All0
ORF1ab/nsp4435L435del1ctAct-23B.1.1.70.000002
ORF1ab/nsp4435L435del1cTac-a13B.1.1.70.000001
ORF1ab/nsp4435L435del1cTAc-N22AY.40.000003
ORF1ab/nsp4435L435del1ctAct-22AY.750.000112
ORF1ab/nsp4435L435del1cTAc-N22B.1.20.000018
ORF1ab/nsp4435L435del1Cta-ta22B.1.6270.00404
ORF1ab/nsp4435L435del1ctAct-11AY.160.00038
ORF1ab/nsp4435L435del1ctAct-11AY.390.000025
ORF1ab/nsp4435L435del1cTAc-N11AY.440.000006
ORF1ab/nsp4435L435del1cTAc-N11AY.60.000041
ORF1ab/nsp4435L435del1cTAc-N11B.10.000009
ORF1ab/nsp4435L435del1ctAct-11B.1.1.5190.00004
ORF1ab/nsp4435L435del1cTAc-N11B.1.2390.001221
ORF1ab/nsp4435L435del1Cta-ta11B.1.36.290.000517
ORF1ab/nsp4435L435del1ctAct-11P.1.10.000318