CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = I345del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4345I345del2I3108del2delATTG--320.6666679587-9589
ORF1ab/nsp4345I345del2I3108del2delaTTa--310.3333339587-9589

Details of the mutation I345del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4345I345del2ATTG--23All0
ORF1ab/nsp4345I345del2aTTa--13All0
ORF1ab/nsp4345I345del2ATTG--220.111111
ORF1ab/nsp4345I345del2aTTa--11B.1.1.1390.022727