CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = I345del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4345I345del1I3108del1delaTta-t1080.89587-9589
ORF1ab/nsp4345I345del1I3108del1delAtt-tt1010.19587-9589
ORF1ab/nsp4345I345del1I3108del1delatTat-1010.19587-9589

Details of the mutation I345del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4345I345del1aTta-t810All0.000002
ORF1ab/nsp4345I345del1Att-tt110All0
ORF1ab/nsp4345I345del1atTat-110All0
ORF1ab/nsp4345I345del1aTta-t33B.1.20.000026
ORF1ab/nsp4345I345del1aTta-t22AY.1030.000012
ORF1ab/nsp4345I345del1aTta-t22B.1.617.20.000008
ORF1ab/nsp4345I345del1aTta-t11B.10.000009
ORF1ab/nsp4345I345del1atTat-11B.1.1.70.000001
ORF1ab/nsp4345I345del1Att-tt11B.1.617.10.000129